RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 DEFB123Q8N688 67 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 SCFD1Q8WVM8 642 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 GSDMAQ96QA5 445 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 GAD1Q99259 594 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 C17orf80Q9BSJ5 609 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 PLVAPQ9BX97 442 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 TBC1D13Q9NVG8 400 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 ANKFY1Q9P2R3 1169 aa20.42■□□□□ 0.86
LMNA-204ENST00000368298 KIAA1671Q9BY89 1806 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 RECQL4O94761 1208 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 HOXD13P35453 343 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 MLH1P40692 756 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 STK4Q13043 487 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 GRIN2CQ14957 1233 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 EPC2Q52LR7 807 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 XKR4Q5GH76 650 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 ALKAL1Q6UXT8 129 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 CEP120Q8N960 986 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 URGCPQ8TCY9 931 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 CCDC47Q96A33 483 aaKnown RBP20.41■□□□□ 0.86
LMNA-204ENST00000368298 CCDC94Q9BW85 323 aaPredicted RBP20.41■□□□□ 0.86
LMNA-204ENST00000368298 APOL6Q9BWW8 343 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 SLC39A2Q9NP94 309 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 MTMR10Q9NXD2 777 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 PARP2Q9UGN5 583 aa20.41■□□□□ 0.86
LMNA-204ENST00000368298 CARNS1A5YM72 827 aa20.4■□□□□ 0.86
LMNA-204ENST00000368298 OGTO15294 1046 aa20.4■□□□□ 0.86
LMNA-204ENST00000368298 LAG3P18627 525 aa20.4■□□□□ 0.86
LMNA-204ENST00000368298 ADSSP30520 456 aa20.4■□□□□ 0.86
LMNA-204ENST00000368298 PNOCQ13519 176 aa20.4■□□□□ 0.86
LMNA-204ENST00000368298 KIAA0895Q8NCT3 520 aa20.4■□□□□ 0.86
LMNA-204ENST00000368298 P2RX5Q93086 422 aa20.4■□□□□ 0.86
LMNA-204ENST00000368298 ZFP42Q96MM3 310 aa20.4■□□□□ 0.86
LMNA-204ENST00000368298 ACAP3Q96P50 834 aa20.4■□□□□ 0.86
LMNA-204ENST00000368298 IKZF4Q9H2S9 585 aa20.4■□□□□ 0.86
LMNA-204ENST00000368298 AAASQ9NRG9 546 aa20.4■□□□□ 0.86
LMNA-204ENST00000368298 TOPORSQ9NS56 1045 aaPredicted RBP20.4■□□□□ 0.86
LMNA-204ENST00000368298 CHD7Q9P2D1 2997 aa20.4■□□□□ 0.86
LMNA-204ENST00000368298 TISP43B9A030 160 aa20.39■□□□□ 0.85
LMNA-204ENST00000368298 GARTP22102 1010 aa20.39■□□□□ 0.85
LMNA-204ENST00000368298 SNRPFP62306 86 aaKnown RBP20.39■□□□□ 0.85
LMNA-204ENST00000368298 POU5F1Q01860 360 aaKnown RBP20.39■□□□□ 0.85
LMNA-204ENST00000368298 GAS2L3Q86XJ1 694 aa20.39■□□□□ 0.85
LMNA-204ENST00000368298 THNSL1Q8IYQ7 743 aa20.39■□□□□ 0.85
LMNA-204ENST00000368298 SYCP3Q8IZU3 236 aa20.39■□□□□ 0.85
LMNA-204ENST00000368298 MIOSQ9NXC5 875 aa20.39■□□□□ 0.85
LMNA-204ENST00000368298 HCSTQ9UBK5 93 aa20.39■□□□□ 0.85
LMNA-204ENST00000368298 INPP5FQ9Y2H2 1132 aa20.39■□□□□ 0.85
LMNA-204ENST00000368298 GDAQ9Y2T3 454 aa20.39■□□□□ 0.85
LMNA-204ENST00000368298 PCDHA5Q9Y5H7 936 aa20.39■□□□□ 0.85
LMNA-204ENST00000368298 TDRD15B5MCY1 1934 aaKnown RBP20.39■□□□□ 0.85
LMNA-204ENST00000368298 H3BNC9 293 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 SMC2O95347 1197 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 ADRB2P07550 413 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 CLTAP09496 248 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 YARSP54577 528 aaKnown RBP20.38■□□□□ 0.85
LMNA-204ENST00000368298 DSC1Q08554 894 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 COLGALT1Q8NBJ5 622 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 FBXO22Q8NEZ5 403 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 ARNTL2Q8WYA1 636 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 MSTO1Q9BUK6 570 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 GBP3Q9H0R5 595 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 NRDE2Q9H7Z3 1164 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 CERS4Q9HA82 394 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 PLEKHA5Q9HAU0 1116 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 RMND1Q9NWS8 449 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 KLK14Q9P0G3 267 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 CITO14578 2027 aa20.38■□□□□ 0.85
LMNA-204ENST00000368298 EPOPA6NHQ4 379 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 PTGESO14684 152 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 KIAA0391O15091 583 aaKnown RBP20.37■□□□□ 0.85
LMNA-204ENST00000368298 TGFB1I1O43294 461 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 DDHD2O94830 711 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 POMCP01189 267 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 POU3F3P20264 500 aaPredicted RBP20.37■□□□□ 0.85
LMNA-204ENST00000368298 MATR3P43243 847 aaKnown RBP eCLIP20.37■□□□□ 0.85
LMNA-204ENST00000368298 SCNN1GP51170 649 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 GRIK3Q13003 919 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 KNOP1Q1ED39 458 aaKnown RBP20.37■□□□□ 0.85
LMNA-204ENST00000368298 KCNT2Q6UVM3 1135 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 ZNF280BQ86YH2 543 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 FAM161BQ96MY7 647 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 TMEM175Q9BSA9 504 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 C11orf84Q9BUA3 381 aaPredicted RBP20.37■□□□□ 0.85
LMNA-204ENST00000368298 GTPBP4Q9BZE4 634 aaKnown RBP20.37■□□□□ 0.85
LMNA-204ENST00000368298 CGNQ9P2M7 1197 aaKnown RBP20.37■□□□□ 0.85
LMNA-204ENST00000368298 CPSF3Q9UKF6 684 aaKnown RBP20.37■□□□□ 0.85
LMNA-204ENST00000368298 AGO2Q9UKV8 859 aaKnown RBP20.37■□□□□ 0.85
LMNA-204ENST00000368298 PCDHB12Q9Y5F1 795 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 MEFVO15553 781 aaPredicted RBP20.37■□□□□ 0.85
LMNA-204ENST00000368298 LPXNO60711 386 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 CTNNB1P35222 781 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 MRE11P49959 708 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 OSTNP61366 133 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 RNASELQ05823 741 aaKnown RBP20.37■□□□□ 0.85
LMNA-204ENST00000368298 NAB2Q15742 525 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 SLC10A6Q3KNW5 377 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 COLGALT2Q8IYK4 626 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 TMEM174Q8WUU8 243 aa20.37■□□□□ 0.85
LMNA-204ENST00000368298 POMGNT1Q8WZA1 660 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 551.3 ms