RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 POU5F1BQ06416 359 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 NR1H3Q13133 447 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 ORC2Q13416 577 aaPredicted RBP12.35□□□□□ -0.43
H3F3A-203ENST00000366815 CAPSQ13938 189 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 MXD4Q14582 209 aaPredicted RBP12.35□□□□□ -0.43
H3F3A-203ENST00000366815 PCBP1Q15365 356 aaKnown RBP eCLIP12.35□□□□□ -0.43
H3F3A-203ENST00000366815 NOMO2Q5JPE7 1267 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 LCE2CQ5TA81 110 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 TMEM173Q86WV6 379 aaPredicted RBP12.35□□□□□ -0.43
H3F3A-203ENST00000366815 ASAP3Q8TDY4 903 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 PIGOQ8TEQ8 1089 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 ENTPD7Q9NQZ7 604 aa12.35□□□□□ -0.43
H3F3A-203ENST00000366815 NXF1Q9UBU9 619 aaKnown RBP12.35□□□□□ -0.43
H3F3A-203ENST00000366815 FAM86C2PA6NEL3 165 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 TSPAN1O60635 241 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 ZC3H11AO75152 810 aaKnown RBP eCLIP12.34□□□□□ -0.43
H3F3A-203ENST00000366815 MED24O75448 989 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 NCLP19338 710 aaKnown RBP12.34□□□□□ -0.43
H3F3A-203ENST00000366815 GLRA2P23416 452 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 ALDH7A1P49419 539 aaKnown RBP12.34□□□□□ -0.43
H3F3A-203ENST00000366815 AFF1P51825 1210 aaKnown RBP12.34□□□□□ -0.43
H3F3A-203ENST00000366815 MBTD1Q05BQ5 628 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 TMEM31Q5JXX7 168 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 TMC7Q7Z402 723 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 CATSPER3Q86XQ3 398 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 NOSTRINQ8IVI9 506 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 MRPL43Q8N983 215 aaKnown RBP12.34□□□□□ -0.43
H3F3A-203ENST00000366815 SMG8Q8ND04 991 aaKnown RBP12.34□□□□□ -0.43
H3F3A-203ENST00000366815 ADAM32Q8TC27 787 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 BCL7CQ8WUZ0 217 aaPredicted RBP12.34□□□□□ -0.43
H3F3A-203ENST00000366815 SUSD6Q92537 303 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 ZNF592Q92610 1267 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 PGBD4Q96DM1 585 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 POP1Q99575 1024 aaKnown RBP12.34□□□□□ -0.43
H3F3A-203ENST00000366815 NFKBIZQ9BYH8 718 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 ZBP1Q9H171 429 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 TUFT1Q9NNX1 390 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 DNAJB4Q9UDY4 337 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 DBR1Q9UK59 544 aaKnown RBP12.34□□□□□ -0.43
H3F3A-203ENST00000366815 INPP5FQ9Y2H2 1132 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 USP15Q9Y4E8 981 aaPredicted RBP12.34□□□□□ -0.43
H3F3A-203ENST00000366815 TDRD15B5MCY1 1934 aaKnown RBP12.34□□□□□ -0.43
H3F3A-203ENST00000366815 CNTNAP2Q9UHC6 1331 aa12.34□□□□□ -0.43
H3F3A-203ENST00000366815 CARNS1A5YM72 827 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 C2orf71A6NGG8 1288 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 DCXO43602 365 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 USO1O60763 962 aaKnown RBP12.33□□□□□ -0.44
H3F3A-203ENST00000366815 ERLIN2O94905 339 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 GALTP07902 379 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 OR52Z1P0C646 297 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 ALADP13716 330 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 AXLP30530 894 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 TECP42680 631 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 NNTQ13423 1086 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 TFDP1Q14186 410 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 SMC1AQ14683 1233 aaKnown RBP12.33□□□□□ -0.44
H3F3A-203ENST00000366815 ZNF174Q15697 407 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 TTC38Q5R3I4 469 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 ANKRD54Q6NXT1 300 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 SYCE2Q6PIF2 218 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 ZNF280BQ86YH2 543 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 C4orf32Q8N8J7 132 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 TMEM169Q96HH4 297 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 IGSF21Q96ID5 467 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 OCSTAMPQ9BR26 566 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 POLR3CQ9BUI4 534 aaPredicted RBP12.33□□□□□ -0.44
H3F3A-203ENST00000366815 VN1R3Q9BXE9 311 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 EIF2AQ9BY44 585 aaKnown RBP12.33□□□□□ -0.44
H3F3A-203ENST00000366815 POLR3FQ9H1D9 316 aaPredicted RBP12.33□□□□□ -0.44
H3F3A-203ENST00000366815 S1PR5Q9H228 398 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 RSAD1Q9HA92 442 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 IPPQ9Y573 584 aa12.33□□□□□ -0.44
H3F3A-203ENST00000366815 LOC730098B7Z3J9 87 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 INO80B-WBP1J3KQ70 363 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 INPPL1O15357 1258 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 DDHD2O94830 711 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 ARF4P18085 180 aaPredicted RBP12.32□□□□□ -0.44
H3F3A-203ENST00000366815 U2AF2P26368 475 aaKnown RBP eCLIP12.32□□□□□ -0.445e-17■■■■■ 30.9
H3F3A-203ENST00000366815 RPA1P27694 616 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 TRAPPC10P48553 1259 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 SLC11A1P49279 550 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 RNASELQ05823 741 aaKnown RBP12.32□□□□□ -0.44
H3F3A-203ENST00000366815 CBX2Q14781 532 aaPredicted RBP12.32□□□□□ -0.44
H3F3A-203ENST00000366815 NOTUMQ6P988 496 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 DDX53Q86TM3 631 aaKnown RBP12.32□□□□□ -0.44
H3F3A-203ENST00000366815 VPS52Q8N1B4 723 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 FAM184AQ8NB25 1140 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 CNNM3Q8NE01 707 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 URGCPQ8TCY9 931 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 CCDC51Q96ER9 411 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 CPB2Q96IY4 423 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 CCDC43Q96MW1 224 aaKnown RBP12.32□□□□□ -0.44
H3F3A-203ENST00000366815 CSRNP2Q9H175 543 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 GPRC5CQ9NQ84 441 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 HCFC2Q9Y5Z7 792 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 IRAK3Q9Y616 596 aa12.32□□□□□ -0.44
H3F3A-203ENST00000366815 PRR33A8MZF0 331 aa12.31□□□□□ -0.44
H3F3A-203ENST00000366815 B4GALT5O43286 388 aa12.31□□□□□ -0.44
H3F3A-203ENST00000366815 CLASP2O75122 1294 aaKnown RBP12.31□□□□□ -0.44
H3F3A-203ENST00000366815 SRGAP2BP0DMP2 458 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms