RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 TFAP2BQ92481 460 aa0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 IL17RAQ96F46 866 aa0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 C1orf159Q96HA4 380 aa0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 BOD1Q96IK1 185 aa0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 WDR92Q96MX6 357 aa0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 HAPLN3Q96S86 360 aa0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 EGLN1Q9GZT9 426 aa0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 GALNT9Q9HCQ5 603 aa0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 ING3Q9NXR8 418 aa0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 USP36Q9P275 1121 aaKnown RBP0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 PARP2Q9UGN5 583 aa0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 SERPINA10Q9UK55 444 aa0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 SQORQ9Y6N5 450 aa0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 FCGBPQ9Y6R7 5405 aaPredicted RBP0.62□□□□□ -2.31
RNU6-340P-201ENST00000364005 ZBTB7CA1YPR0 619 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 TISP43B9A030 160 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 NRP1O14786 923 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 YY2O15391 372 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 MPPED1O15442 326 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 NHLRC4P0CG21 123 aaPredicted RBP0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 PRF1P14222 555 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 MGAT1P26572 445 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 TNFRSF8P28908 595 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 VEGFCP49767 419 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 WNT3AP56704 352 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 CXADRP78310 365 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 RPL36AP83881 106 aaKnown RBP0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 CFHR1Q03591 330 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 RBMS2Q15434 407 aaKnown RBP0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 DGKDQ16760 1214 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 AGAP9Q5VTM2 703 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 ZNF324BQ6AW86 544 aaPredicted RBP0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 EFCAB12Q6NXP0 572 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 LBX2Q6XYB7 198 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 EP400NLQ6ZTU2 488 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 MYPOPQ86VE0 399 aaPredicted RBP0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 PTRH1Q86Y79 214 aaKnown RBP0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 THNSL2Q86YJ6 484 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 LILRB2Q8N423 598 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 HIPK4Q8NE63 616 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 OR56A1Q8NGH5 318 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 OR5AN1Q8NGI8 311 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 PIGOQ8TEQ8 1089 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 FBXO41Q8TF61 875 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 ASB15Q8WXK1 588 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 NACC2Q96BF6 587 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 COQ8BQ96D53 544 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 GBP4Q96PP9 640 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 MEIS3Q99687 375 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 PHF20Q9BVI0 1012 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 C1QTNF5Q9BXJ0 243 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 KRTAP4-1Q9BYQ7 146 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 DNAI1Q9UI46 699 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 ICAM5Q9UMF0 924 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 PPT2Q9UMR5 302 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 COL4A4P53420 1690 aaPredicted RBP0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 SNED1Q8TER0 1413 aa0.61□□□□□ -2.31
RNU6-340P-201ENST00000364005 DRGXA6NNA5 263 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 LINC00473A8K010 186 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 PRRT4C9JH25 899 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 FAM47E-STBD1D6RA91 191 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 E5RJQ4 531 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 ACOT8O14734 319 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 TOMM40O96008 361 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 SOD2P04179 222 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 AMY2AP04746 511 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 HNRNPCP07910 306 aaKnown RBP eCLIP0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 UMODP07911 640 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 NAT2P11245 290 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 AMY2BP19961 511 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 NFATC4Q14934 902 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 SEC23AQ15436 765 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 GPR19Q15760 415 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 NAALADL2Q58DX5 795 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 TSHZ3Q63HK5 1081 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 ANKS6Q68DC2 871 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 CYB5RLQ6IPT4 315 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 OSTM1Q86WC4 334 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 PELI3Q8N2H9 469 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 FAM43AQ8N2R8 423 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 GALNT16Q8N428 558 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 RNF169Q8NCN4 708 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 CTCFLQ8NI51 663 aaPredicted RBP0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 SSH3Q8TE77 659 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 WIPF2Q8TF74 440 aaPredicted RBP0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 ANKRD9Q96BM1 317 aaPredicted RBP0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 DYDC2Q96IM9 177 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 FAM161BQ96MY7 647 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 ZSWIM1Q9BR11 485 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 IPPKQ9H8X2 491 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 MLXIPQ9HAP2 919 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 POT1Q9NUX5 634 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 KLHL11Q9NVR0 708 aa0.6□□□□□ -2.31
RNU6-340P-201ENST00000364005 GOLGA6L22H0YM25 854 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 KCNK3O14649 394 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 BCAR3O75815 825 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 NGFRP08138 427 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 PSG1P11464 419 aa0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 FGF3P11487 239 aaPredicted RBP0.59□□□□□ -2.31
RNU6-340P-201ENST00000364005 KRT15P19012 456 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms