RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ACTR2P61160 394 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 ROR1Q01973 937 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 RNF180Q86T96 592 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 RFFLQ8WZ73 363 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 TTC17Q96AE7 1141 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 SEPT5Q99719 369 aaPredicted RBP19.7■□□□□ 0.74
CLIP2-202ENST00000361545 RTFDC1Q9BY42 306 aaPredicted RBP19.7■□□□□ 0.74
CLIP2-202ENST00000361545 GBA2Q9HCG7 927 aaPredicted RBP19.7■□□□□ 0.74
CLIP2-202ENST00000361545 MST1RQ04912 1400 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 TFRCP02786 760 aaKnown RBP19.7■□□□□ 0.74
CLIP2-202ENST00000361545 SULT1E1P49888 294 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 LIG3P49916 1009 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 CASP8Q14790 479 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 KDELC2Q7Z4H8 507 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 CATSPER3Q86XQ3 398 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 TRIM59Q8IWR1 403 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 C1orf54Q8WWF1 131 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 OSBPL9Q96SU4 736 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 FAM49BQ9NUQ9 324 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 TSR3Q9UJK0 312 aaKnown RBP19.7■□□□□ 0.74
CLIP2-202ENST00000361545 ADGRG1Q9Y653 693 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 RHOBTB3O94955 611 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 CHEK2O96017 543 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 SMARCA1P28370 1054 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 DRP2Q13474 957 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 SGSM1Q2NKQ1 1148 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 HABP4Q5JVS0 413 aaKnown RBP19.7■□□□□ 0.74
CLIP2-202ENST00000361545 CEP120Q8N960 986 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 MAML1Q92585 1016 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 VPS11Q9H270 941 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 CTDNEP1O95476 244 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 EIF3BP55884 814 aaKnown RBP19.7■□□□□ 0.74
CLIP2-202ENST00000361545 TARS2Q9BW92 718 aaKnown RBP19.7■□□□□ 0.74
CLIP2-202ENST00000361545 HPS5Q9UPZ3 1129 aa19.7■□□□□ 0.74
CLIP2-202ENST00000361545 MSH4O15457 936 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 FAM8A1Q9UBU6 413 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 PLAAQ9Y263 795 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 ESYT3A0FGR9 886 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 EVI5O60447 810 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 RGS2P41220 211 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 ZNF235Q14590 738 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 C6orf118Q5T5N4 469 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 UNC45AQ9H3U1 944 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 PLEKHA5Q9HAU0 1116 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 DDX56Q9NY93 547 aaKnown RBP19.69■□□□□ 0.74
CLIP2-202ENST00000361545 COPEO14579 308 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 PRRG1O14668 218 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 CLCN6P51797 869 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 XRRA1Q6P2D8 792 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 ANO9A1A5B4 782 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 OCRLQ01968 901 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 RBBP8NLQ8NC74 664 aaPredicted RBP19.69■□□□□ 0.74
CLIP2-202ENST00000361545 OR6P1Q8NGX9 317 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 GPRASP2Q96D09 838 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 RMDN1Q96DB5 314 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 PRMT7Q9NVM4 692 aaPredicted RBP19.69■□□□□ 0.74
CLIP2-202ENST00000361545 CAPN11Q9UMQ6 739 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 TTI1O43156 1089 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 SLC37A4O43826 429 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 NPTXRO95502 500 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 TAC1P20366 129 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 ADCY2Q08462 1091 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 MAP1SQ66K74 1059 aaPredicted RBP19.69■□□□□ 0.74
CLIP2-202ENST00000361545 PID1Q7Z2X4 250 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 AKT1S1Q96B36 256 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 TRIM62Q9BVG3 475 aa19.69■□□□□ 0.74
CLIP2-202ENST00000361545 HSPA4LO95757 839 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 PPP2R3CQ969Q6 453 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 PPWD1Q96BP3 646 aaKnown RBP19.68■□□□□ 0.74
CLIP2-202ENST00000361545 MAGEB5Q9BZ81 275 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 WNT8AQ9H1J5 351 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 RAD51Q06609 339 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 PLEKHH3Q7Z736 793 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 PPM1NQ8N819 430 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 RNF217Q8TC41 542 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 CALR3Q96L12 384 aaKnown RBP19.68■□□□□ 0.74
CLIP2-202ENST00000361545 CPA4Q9UI42 421 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 NR1D1P20393 614 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 CLNS1AP54105 237 aaKnown RBP19.68■□□□□ 0.74
CLIP2-202ENST00000361545 MTF1Q14872 753 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 ADGRA1Q86SQ6 560 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 ZNF512Q96ME7 567 aaPredicted RBP19.68■□□□□ 0.74
CLIP2-202ENST00000361545 SNX2O60749 519 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 RTN2O75298 545 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 KRT38O76015 456 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 PDGFRAP16234 1089 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 THPOP40225 353 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 TPI1P60174 286 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 ALS2CLQ60I27 953 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 TRIM68Q6AZZ1 485 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 ITPRIPL1Q6GPH6 555 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 EMBQ6PCB8 327 aa19.68■□□□□ 0.74
CLIP2-202ENST00000361545 CDKL3Q8IVW4 592 aaPredicted RBP19.68■□□□□ 0.74
CLIP2-202ENST00000361545 PRG3Q9Y2Y8 225 aaPredicted RBP19.68■□□□□ 0.74
CLIP2-202ENST00000361545 GRAP2O75791 330 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 CD4P01730 458 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 KRT14P02533 472 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 WEE2P0C1S8 567 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 PRAMEP78395 509 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 FOXD4Q12950 439 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms