RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 FAM47EQ6ZV65 393 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 ELMOD1Q8N336 334 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 PIK3R5Q8WYR1 880 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 RMDN3Q96TC7 470 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 MRIQ9BWK5 157 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 MEGF6O75095 1541 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 FOXN1O15353 648 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 RTN2O75298 545 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 RFC5P40937 340 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 EPHA7Q15375 998 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 THOC1Q96FV9 657 aaKnown RBP12.96□□□□□ -0.34
DNMT1-202ENST00000359526 CEP95Q96GE4 821 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 FGD4Q96M96 766 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 TRIM9Q9C026 710 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 ZNF302Q9NR11 478 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 TMEM51Q9NW97 253 aa12.96□□□□□ -0.34
DNMT1-202ENST00000359526 EYA4O95677 639 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 PRDX5P30044 214 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 QARSP47897 775 aaKnown RBP12.95□□□□□ -0.34
DNMT1-202ENST00000359526 TRMT10CQ7L0Y3 403 aaKnown RBP12.95□□□□□ -0.34
DNMT1-202ENST00000359526 OLFM3Q96PB7 478 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 ESYT3A0FGR9 886 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 EIF4E1BA6NMX2 242 aaKnown RBP12.95□□□□□ -0.34
DNMT1-202ENST00000359526 COPS2P61201 443 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 SCARA5Q6ZMJ2 495 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 DCLK2Q8N568 766 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 AGPAT1Q99943 283 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 LRRC1Q9BTT6 524 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 HEMGNQ9BXL5 484 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 EIF3HO15372 352 aaKnown RBP eCLIP12.95□□□□□ -0.348e-7■■■■■ 29.8
DNMT1-202ENST00000359526 SKA2Q8WVK7 121 aaPredicted RBP12.95□□□□□ -0.34
DNMT1-202ENST00000359526 HNRNPLLQ8WVV9 542 aaKnown RBP12.95□□□□□ -0.34
DNMT1-202ENST00000359526 TRPV6Q9H1D0 765 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 MYOZ2Q9NPC6 264 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 ITPK1Q13572 414 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 MAPK6Q16659 721 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 ZNF699Q32M78 642 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 C1orf146Q5VVC0 180 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 TMEM270Q6UE05 265 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 CDKL3Q8IVW4 592 aaPredicted RBP12.95□□□□□ -0.34
DNMT1-202ENST00000359526 FOXP3Q9BZS1 431 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 NGRNQ9NPE2 291 aaKnown RBP12.95□□□□□ -0.34
DNMT1-202ENST00000359526 SUN2Q9UH99 717 aa12.95□□□□□ -0.34
DNMT1-202ENST00000359526 SMG5Q9UPR3 1016 aaKnown RBP12.95□□□□□ -0.34
DNMT1-202ENST00000359526 FMN2Q9NZ56 1722 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 COL3A1P02461 1466 aaPredicted RBP12.94□□□□□ -0.34
DNMT1-202ENST00000359526 MCF2P10911 925 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 EEF1DP29692 281 aaKnown RBP12.94□□□□□ -0.34
DNMT1-202ENST00000359526 IL1RL1Q01638 556 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 OCRLQ01968 901 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 FAM83AQ86UY5 434 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 FBXL13Q8NEE6 735 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 ATL2Q8NHH9 583 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 RNPC3Q96LT9 517 aaKnown RBP12.94□□□□□ -0.34
DNMT1-202ENST00000359526 ZBTB18Q99592 522 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 MTRQ99707 1265 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 C11orf70Q9BRQ4 267 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 TMEM260Q9NX78 707 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 ARL2BPQ9Y2Y0 163 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 NKRFO15226 690 aaKnown RBP eCLIP12.94□□□□□ -0.34
DNMT1-202ENST00000359526 MYL3P08590 195 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 EEF1B2P24534 225 aaKnown RBP12.94□□□□□ -0.34
DNMT1-202ENST00000359526 MTF1Q14872 753 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
DNMT1-202ENST00000359526 RNF139Q8WU17 664 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 ETNK1Q9HBU6 452 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 UVRAGQ9P2Y5 699 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 FLT1P17948 1338 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 F5H6K3 240 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 HNRNPCP07910 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
DNMT1-202ENST00000359526 ZFXP17010 805 aaPredicted RBP12.94□□□□□ -0.34
DNMT1-202ENST00000359526 SERPINB4P48594 390 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 KLRC3Q07444 240 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 GRAMD4Q6IC98 578 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 USP17L6PQ6QN14 398 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 BEST2Q8NFU1 509 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 PGBD4Q96DM1 585 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 KBTBD13C9JR72 458 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 NMT2O60551 498 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 ZNF18P17022 549 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 FCGRTP55899 365 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 CORO7P57737 925 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 ZNF211Q13398 564 aaPredicted RBP12.94□□□□□ -0.34
DNMT1-202ENST00000359526 KIAA1755Q5JYT7 1200 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 ANO5Q75V66 913 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 ADGRF4Q8IZF3 695 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 NDUFAF2Q8N183 169 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 TC2NQ8N9U0 490 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 IGDCC4Q8TDY8 1250 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 STK33Q9BYT3 514 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 VCPKMTQ9H867 229 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 PARVAQ9NVD7 372 aa12.94□□□□□ -0.34
DNMT1-202ENST00000359526 RRN3P2A6NIE6 340 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 NVLO15381 856 aaKnown RBP12.93□□□□□ -0.34
DNMT1-202ENST00000359526 SRGAP2CP0DJJ0 459 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 GNA15P30679 374 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 GPC3P51654 580 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 IZUMO3Q5VZ72 239 aa12.93□□□□□ -0.34
DNMT1-202ENST00000359526 PSPC1Q8WXF1 523 aaKnown RBP12.93□□□□□ -0.34
DNMT1-202ENST00000359526 COL14A1Q05707 1796 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms