RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 TM4SF1P30408 202 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 HOXD13P35453 343 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 NPEPPSP55786 919 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 RNASELQ05823 741 aaKnown RBP7.01□□□□□ -1.29
CSDE1-203ENST00000358528 PPP3CAQ08209 521 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ZRSR2Q15696 482 aaKnown RBP7.01□□□□□ -1.29
CSDE1-203ENST00000358528 PLA2G4FQ68DD2 849 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ZNF720Q7Z2F6 126 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 HAUS6Q7Z4H7 955 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 USP37Q86T82 979 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 AMIGO3Q86WK7 504 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 CBWD2Q8IUF1 395 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 CTAGE3PQ8IX95 158 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 DCAF4Q8WV16 495 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 NUDCD1Q96RS6 583 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 FBXO28Q9NVF7 368 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.01□□□□□ -1.297e-7■□□□□ 9.9
CSDE1-203ENST00000358528 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-203ENST00000358528 CCPG1Q9ULG6 757 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 PRR12Q9ULL5 1215 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 AGAP1Q9UPQ3 857 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 BCL9LQ86UU0 1499 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ADAMTS7Q9UKP4 1686 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 PFASO15067 1338 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 SLITRK3O94933 977 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 RALAP11233 206 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 POLD1P28340 1107 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 OVGP1Q12889 678 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 TSNAXIP1Q2TAA8 658 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ANKRD20A3Q5VUR7 823 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 C3orf20Q8ND61 904 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 DTX3LQ8TDB6 740 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 PGM2Q96G03 612 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 RBM15Q96T37 977 aaKnown RBP eCLIP7.01□□□□□ -1.293e-7■■■■□ 23.4
CSDE1-203ENST00000358528 FAM213AQ9BRX8 229 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 WDR11Q9BZH6 1224 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 DNAJC18Q9H819 358 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ANKFY1Q9P2R3 1169 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 PCDHB4Q9Y5E5 795 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 TIAM2Q8IVF5 1701 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ALS2Q96Q42 1657 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ASAP2O43150 1006 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 DNAJC8O75937 253 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-203ENST00000358528 GJB6O95452 261 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 BAG2O95816 211 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 MARSP56192 900 aaKnown RBP7.01□□□□□ -1.29
CSDE1-203ENST00000358528 SOX10P56693 466 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 GPS1Q13098 491 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 RCN2Q14257 317 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ITIH4Q14624 930 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 P3H1Q32P28 736 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 CEP55Q53EZ4 464 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 PPP1R21Q6ZMI0 780 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 TMEM179Q6ZVK1 233 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 NOP9Q86U38 636 aaKnown RBP7.01□□□□□ -1.29
CSDE1-203ENST00000358528 LONP2Q86WA8 852 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ZBED8Q8IZ13 594 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 RASGEF1CQ8N431 466 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 GBP7Q8N8V2 638 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ZSWIM2Q8NEG5 633 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 PPP1R14CQ8TAE6 165 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 OSBPL1AQ9BXW6 950 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 COA1Q9GZY4 146 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ATP6V0A4Q9HBG4 840 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 NPHS2Q9NP85 383 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 MYH7BA7E2Y1 1941 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 MYH1P12882 1939 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 MYH4Q9Y623 1939 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 LRRD1A4D1F6 860 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 CFAP69A5D8W1 941 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 EDIL3O43854 480 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 KIF1CO43896 1103 aaKnown RBP7□□□□□ -1.29
CSDE1-203ENST00000358528 KRT1P04264 644 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 KRT10P13645 584 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 CD19P15391 556 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 MMP13P45452 471 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 XRCC4Q13426 336 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 BBS9Q3SYG4 887 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 EAPPQ56P03 285 aaPredicted RBP7□□□□□ -1.29
CSDE1-203ENST00000358528 PALM2Q8IXS6 379 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 GADD45GIP1Q8TAE8 222 aaPredicted RBP7□□□□□ -1.29
CSDE1-203ENST00000358528 ETNPPLQ8TBG4 499 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 UNC45AQ9H3U1 944 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 TMEM206Q9H813 350 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 KIF9Q9HAQ2 790 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 KMT5AQ9NQR1 393 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 TXLNGQ9NUQ3 528 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 RAB20Q9NX57 234 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 C15orf41Q9Y2V0 281 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 MRPL11Q9Y3B7 192 aaKnown RBP7□□□□□ -1.29
CSDE1-203ENST00000358528 SNED1Q8TER0 1413 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 RPTORQ8N122 1335 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 DENND3A2RUS2 1198 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 BTNL10A8MVZ5 291 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 MAPK13O15264 365 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 TROVE2P10155 538 aaKnown RBP eCLIP7□□□□□ -1.29
CSDE1-203ENST00000358528 GHRP10912 638 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 VCAM1P19320 739 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 PIK3CAP42336 1068 aa7□□□□□ -1.29
CSDE1-203ENST00000358528 SMAD1Q15797 465 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms