RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 TRIM33Q9UPN9 1127 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 CCDC88AQ3V6T2 1871 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 LAMB1P07942 1786 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 SYNGAP1Q96PV0 1343 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 IRS2Q9Y4H2 1338 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 GSTTP1A0A1W2PQM5 241 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 IGF2BP3O00425 579 aaKnown RBP eCLIP8.81□□□□□ -1
CDC42SE1-201ENST00000357235 RIPK2O43353 540 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 PHF2O75151 1096 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 HOXA7P31268 230 aaPredicted RBP8.81□□□□□ -1
CDC42SE1-201ENST00000357235 SHMT1P34896 483 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 PDE6CP51160 858 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 ALDH5A1P51649 535 aaPredicted RBP8.81□□□□□ -1
CDC42SE1-201ENST00000357235 CCNG1P51959 295 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 DLG4P78352 724 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 LACTBP83111 547 aaPredicted RBP8.81□□□□□ -1
CDC42SE1-201ENST00000357235 SPIRE1Q08AE8 756 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 DHX34Q14147 1143 aaKnown RBP8.81□□□□□ -1
CDC42SE1-201ENST00000357235 SGSM1Q2NKQ1 1148 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 FAM47EQ6ZV65 393 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 PPM1KQ8N3J5 372 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 ETNPPLQ8TBG4 499 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 KAT5Q92993 513 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 MKL1Q969V6 931 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 FGD4Q96M96 766 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 PWWP2AQ96N64 755 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 NAP1L4Q99733 375 aaKnown RBP8.81□□□□□ -1
CDC42SE1-201ENST00000357235 SYT15Q9BQS2 421 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 VCXQ9H320 206 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 GALNT8Q9NY28 637 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 PNMA3Q9UL41 463 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 MTUS1Q9ULD2 1270 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 INTUQ9ULD6 942 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 ATF5Q9Y2D1 282 aaPredicted RBP8.81□□□□□ -1
CDC42SE1-201ENST00000357235 THRAP3Q9Y2W1 955 aaKnown RBP8.81□□□□□ -1
CDC42SE1-201ENST00000357235 FAM187AA6NFU0 413 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 MAP3K13O43283 966 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 HIP1RO75146 1068 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 AGTP01019 485 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 GH1P01241 217 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 NUDT17P0C025 328 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 DESP17661 470 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 VCAM1P19320 739 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 CHRNA3P32297 505 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 GJC1P36383 396 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 TUBP50607 506 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 NPEPPSP55786 919 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 PPATQ06203 517 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 TRAPPC3LQ5T215 181 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 MFSD4BQ5TF39 518 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 TMEM154Q6P9G4 183 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 TSHZ1Q6ZSZ6 1077 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 EPM2AIP1Q7L775 607 aaPredicted RBP8.8□□□□□ -1
CDC42SE1-201ENST00000357235 FBXO11Q86XK2 927 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 SLC30A5Q8TAD4 765 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 ATG4AQ8WYN0 398 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 SEC14L1Q92503 715 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 PGM2Q96G03 612 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 AGPAT1Q99943 283 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 AMNQ9BXJ7 453 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 ARHGEF10LQ9HCE6 1279 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 GRHL1Q9NZI5 618 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 PHF24Q9UPV7 400 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 EMSYQ7Z589 1322 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 MYO3BQ8WXR4 1341 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 SLC16A3O15427 465 aaKnown RBP8.8□□□□□ -1
CDC42SE1-201ENST00000357235 CLDN3O15551 220 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 BCRP11274 1271 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 GABPAQ06546 454 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 KLC1Q07866 573 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 AUHQ13825 339 aaKnown RBP8.8□□□□□ -1
CDC42SE1-201ENST00000357235 PPP2R5EQ16537 467 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 ZFYVE27Q5T4F4 411 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 CAPN12Q6ZSI9 719 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 ZDHHC14Q8IZN3 488 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 STMN4Q9H169 189 aaPredicted RBP8.8□□□□□ -1
CDC42SE1-201ENST00000357235 GOLGA8IPA6NC78 632 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 GOLGA8JA6NMD2 632 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 PODXLO00592 558 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 ASAP2O43150 1006 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 SUN1O94901 812 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 ATP2B4P23634 1241 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 STX2P32856 288 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 CNGA2Q16280 664 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 KYNUQ16719 465 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 CERKLQ49MI3 558 aaPredicted RBP8.8□□□□□ -1
CDC42SE1-201ENST00000357235 C2CD6Q53TS8 623 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 HP1BP3Q5SSJ5 553 aaPredicted RBP8.8□□□□□ -1
CDC42SE1-201ENST00000357235 RINLQ6ZS11 566 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 APBB1IPQ7Z5R6 666 aaPredicted RBP8.8□□□□□ -1
CDC42SE1-201ENST00000357235 EXOC3L1Q86VI1 746 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 RHOT2Q8IXI1 618 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 ZC3H3Q8IXZ2 948 aaKnown RBP8.8□□□□□ -1
CDC42SE1-201ENST00000357235 SRRM1Q8IYB3 904 aaKnown RBP8.8□□□□□ -1
CDC42SE1-201ENST00000357235 TBC1D16Q8TBP0 767 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 KIFAP3Q92845 792 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 CCDC127Q96BQ5 260 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 TSPAN18Q96SJ8 248 aa8.8□□□□□ -1
CDC42SE1-201ENST00000357235 CDC42EP4Q9H3Q1 356 aaKnown RBP8.8□□□□□ -1
CDC42SE1-201ENST00000357235 PREBQ9HCU5 417 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms