RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 TOPORSQ9NS56 1045 aaPredicted RBP14.53□□□□□ -0.08
TRIM4-203ENST00000355947 ZFATQ9P243 1243 aa14.53□□□□□ -0.08
TRIM4-203ENST00000355947 ZNF148Q9UQR1 794 aa14.53□□□□□ -0.08
TRIM4-203ENST00000355947 SRRM3A6NNA2 597 aaPredicted RBP14.53□□□□□ -0.08
TRIM4-203ENST00000355947 ATP5DP30049 168 aa14.53□□□□□ -0.08
TRIM4-203ENST00000355947 FOXN2P32314 431 aa14.53□□□□□ -0.08
TRIM4-203ENST00000355947 RFC5P40937 340 aa14.53□□□□□ -0.08
TRIM4-203ENST00000355947 SLC8A3P57103 927 aa14.53□□□□□ -0.08
TRIM4-203ENST00000355947 PPATQ06203 517 aa14.53□□□□□ -0.08
TRIM4-203ENST00000355947 ZNF268Q14587 947 aaPredicted RBP14.53□□□□□ -0.08
TRIM4-203ENST00000355947 PPP2R5EQ16537 467 aa14.53□□□□□ -0.08
TRIM4-203ENST00000355947 MEX3CQ5U5Q3 659 aaKnown RBP14.53□□□□□ -0.08
TRIM4-203ENST00000355947 VPS52Q8N1B4 723 aa14.53□□□□□ -0.08
TRIM4-203ENST00000355947 RAB3IPQ96QF0 476 aaPredicted RBP14.53□□□□□ -0.08
TRIM4-203ENST00000355947 RPS6KC1Q96S38 1066 aa14.53□□□□□ -0.08
TRIM4-203ENST00000355947 KIFC3Q9BVG8 833 aa14.53□□□□□ -0.08
TRIM4-203ENST00000355947 C10orf88Q9H8K7 445 aa14.53□□□□□ -0.08
TRIM4-203ENST00000355947 AGPAT3Q9NRZ7 376 aa14.53□□□□□ -0.08
TRIM4-203ENST00000355947 R3HDM2Q9Y2K5 976 aaKnown RBP14.53□□□□□ -0.08
TRIM4-203ENST00000355947 CACNA1SQ13698 1873 aa14.52□□□□□ -0.08
TRIM4-203ENST00000355947 BAG2O95816 211 aa14.52□□□□□ -0.08
TRIM4-203ENST00000355947 CHRNB2P17787 502 aa14.52□□□□□ -0.08
TRIM4-203ENST00000355947 RPA1P27694 616 aa14.52□□□□□ -0.08
TRIM4-203ENST00000355947 ABL2P42684 1182 aa14.52□□□□□ -0.08
TRIM4-203ENST00000355947 JAM2P57087 298 aa14.52□□□□□ -0.08
TRIM4-203ENST00000355947 STRN3Q13033 797 aa14.52□□□□□ -0.08
TRIM4-203ENST00000355947 SMAD1Q15797 465 aaKnown RBP14.52□□□□□ -0.08
TRIM4-203ENST00000355947 IZUMO3Q5VZ72 239 aa14.52□□□□□ -0.08
TRIM4-203ENST00000355947 ZNF483Q8TF39 744 aaPredicted RBP14.52□□□□□ -0.08
TRIM4-203ENST00000355947 CENPTQ96BT3 561 aa14.52□□□□□ -0.08
TRIM4-203ENST00000355947 DDX50Q9BQ39 737 aaKnown RBP14.52□□□□□ -0.08
TRIM4-203ENST00000355947 RTN2O75298 545 aa14.52□□□□□ -0.09
TRIM4-203ENST00000355947 MXI1P50539 228 aa14.52□□□□□ -0.09
TRIM4-203ENST00000355947 BNIP1Q12981 228 aa14.52□□□□□ -0.09
TRIM4-203ENST00000355947 RCN2Q14257 317 aa14.52□□□□□ -0.09
TRIM4-203ENST00000355947 RXFP1Q9HBX9 757 aa14.52□□□□□ -0.09
TRIM4-203ENST00000355947 HOMER2Q9NSB8 354 aa14.52□□□□□ -0.09
TRIM4-203ENST00000355947 PHTF1Q9UMS5 762 aa14.52□□□□□ -0.09
TRIM4-203ENST00000355947 C2orf71A6NGG8 1288 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 O00370 1275 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 UBTFL6P0CB48 400 aaPredicted RBP14.51□□□□□ -0.09
TRIM4-203ENST00000355947 HARSP12081 509 aaKnown RBP14.51□□□□□ -0.09
TRIM4-203ENST00000355947 PLS3P13797 630 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 TUBP50607 506 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 NOP14P78316 857 aaKnown RBP14.51□□□□□ -0.09
TRIM4-203ENST00000355947 IRX1P78414 480 aaPredicted RBP14.51□□□□□ -0.09
TRIM4-203ENST00000355947 PPP3CAQ08209 521 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 BFSP1Q12934 665 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 LRRC36Q1X8D7 754 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 TSNAXIP1Q2TAA8 658 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 NOP9Q86U38 636 aaKnown RBP14.51□□□□□ -0.09
TRIM4-203ENST00000355947 TMEM117Q9H0C3 514 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 SLC5A4Q9NY91 659 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 KRT10P13645 584 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 ETS1P14921 441 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 MGAT5Q09328 741 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 RNF220Q5VTB9 566 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 MIS18BP1Q6P0N0 1132 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 GBP7Q8N8V2 638 aaPredicted RBP14.51□□□□□ -0.09
TRIM4-203ENST00000355947 TXLNGQ9NUQ3 528 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 A0A0A6YYK5 440 aaPredicted RBP14.51□□□□□ -0.09
TRIM4-203ENST00000355947 MIF4GDA9UHW6 222 aaKnown RBP14.51□□□□□ -0.09
TRIM4-203ENST00000355947 ZCCHC18P0CG32 403 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 CTNNA2P26232 953 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 RHBDL3P58872 404 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 EIF1ADQ8N9N8 165 aaKnown RBP14.51□□□□□ -0.09
TRIM4-203ENST00000355947 TEKT4Q8WW24 435 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 RBM15Q96T37 977 aaKnown RBP eCLIP14.51□□□□□ -0.094e-6■□□□□ 8.6
TRIM4-203ENST00000355947 AMNQ9BXJ7 453 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 GPRC5CQ9NQ84 441 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 NINJ2Q9NZG7 142 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 KCNG1Q9UIX4 513 aa14.51□□□□□ -0.09
TRIM4-203ENST00000355947 DCCP43146 1447 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 BTNL10A8MVZ5 291 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 RALAP11233 206 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 PIK3CAP42336 1068 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 MARSP56192 900 aaKnown RBP14.5□□□□□ -0.09
TRIM4-203ENST00000355947 ICA1Q05084 483 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 TAF1BQ53T94 588 aaPredicted RBP14.5□□□□□ -0.09
TRIM4-203ENST00000355947 GPATCH4Q5T3I0 446 aaKnown RBP14.5□□□□□ -0.09
TRIM4-203ENST00000355947 MTDHQ86UE4 582 aaKnown RBP14.5□□□□□ -0.09
TRIM4-203ENST00000355947 AMIGO3Q86WK7 504 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 RNF217Q8TC41 542 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 PLVAPQ9BX97 442 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 BATF3Q9NR55 127 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 SNED1Q8TER0 1413 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 SLC16A4O15374 487 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 TTC4O95801 387 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 ATP4AP20648 1035 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 RBBP5Q15291 538 aaKnown RBP14.5□□□□□ -0.09
TRIM4-203ENST00000355947 PKN2Q16513 984 aaKnown RBP14.5□□□□□ -0.09
TRIM4-203ENST00000355947 P3H1Q32P28 736 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 CRELD2Q6UXH1 353 aaPredicted RBP14.5□□□□□ -0.09
TRIM4-203ENST00000355947 STXBP4Q6ZWJ1 553 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 UCMAQ8WVF2 138 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 CKAP2Q8WWK9 683 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 C11orf70Q9BRQ4 267 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 TBC1D10AQ9BXI6 508 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 TRABDQ9H4I3 376 aa14.5□□□□□ -0.09
TRIM4-203ENST00000355947 ZFP69BQ9UJL9 534 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms