RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 DNAJB2P25686 324 aa19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 GRM5P41594 1212 aa19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 BTG3Q14201 252 aaPredicted RBP19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 SLFN12LQ6IEE8 588 aa19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 CAVIN1Q6NZI2 390 aaKnown RBP19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 ARMCX5Q6P1M9 558 aa19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 HACE1Q8IYU2 909 aa19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 LRCH3Q96II8 777 aa19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 RNF216Q9NWF9 866 aaPredicted RBP19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 MIOSQ9NXC5 875 aa19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 PCDHA11Q9Y5I1 949 aa19.52■□□□□ 0.71
PDLIM7-202ENST00000355841 TULP1O00294 542 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-202ENST00000355841 OGTO15294 1046 aa19.51■□□□□ 0.71
PDLIM7-202ENST00000355841 POMCP01189 267 aa19.51■□□□□ 0.71
PDLIM7-202ENST00000355841 CD44P16070 742 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-202ENST00000355841 SMAD3P84022 425 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-202ENST00000355841 HABP4Q5JVS0 413 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-202ENST00000355841 LRRC55Q6ZSA7 311 aa19.51■□□□□ 0.71
PDLIM7-202ENST00000355841 GUF1Q8N442 669 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-202ENST00000355841 FAM213AQ9BRX8 229 aa19.51■□□□□ 0.71
PDLIM7-202ENST00000355841 CCDC94Q9BW85 323 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-202ENST00000355841 TMEM117Q9H0C3 514 aa19.51■□□□□ 0.71
PDLIM7-202ENST00000355841 MSRAQ9UJ68 235 aa19.51■□□□□ 0.71
PDLIM7-202ENST00000355841 HOXA2O43364 376 aa19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 CXCL8P10145 99 aa19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 SCNN1GP51170 649 aa19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 CYP2J2P51589 502 aa19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 NOMO2Q5JPE7 1267 aa19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 HS2ST1Q7LGA3 356 aa19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 GSTCDQ8NEC7 633 aa19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 ACAP3Q96P50 834 aa19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 SEMA6BQ9H3T3 888 aa19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 TYW1Q9NV66 732 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 PLAGL2Q9UPG8 496 aa19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 GIT1Q9Y2X7 761 aa19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 MRPL42Q9Y6G3 142 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 GBF1Q92538 1859 aa19.5■□□□□ 0.71
PDLIM7-202ENST00000355841 GARTP22102 1010 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 NFKBIBQ15653 356 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 RAB30Q15771 203 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 GLRA4Q5JXX5 417 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 CCDC183Q5T5S1 534 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 KLHL10Q6JEL2 608 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 CRELD2Q6UXH1 353 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 ADSSL1Q8N142 457 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 UBN1Q9NPG3 1134 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 TBC1D13Q9NVG8 400 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 HSPBP1Q9NZL4 362 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 MTUS1Q9ULD2 1270 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 LINC01553A4QN01 128 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 KIF20AO95235 890 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 CLTAP09496 248 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 YARSP54577 528 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 SPAG1Q07617 926 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 ENOX2Q16206 610 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 SLC10A6Q3KNW5 377 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 ZNF280BQ86YH2 543 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 CMTR2Q8IYT2 770 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 SP7Q8TDD2 431 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 TIFAQ96CG3 184 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 FAM212AQ96EL1 285 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 EEF2KMTQ96G04 330 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 CERS4Q9HA82 394 aa19.49■□□□□ 0.71
PDLIM7-202ENST00000355841 PPP1R3GB7ZBB8 358 aa19.48■□□□□ 0.71
PDLIM7-202ENST00000355841 PTGESO14684 152 aa19.48■□□□□ 0.71
PDLIM7-202ENST00000355841 B4GALT3O60512 393 aa19.48■□□□□ 0.71
PDLIM7-202ENST00000355841 PBX3P40426 434 aa19.48■□□□□ 0.71
PDLIM7-202ENST00000355841 PMS1P54277 932 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-202ENST00000355841 KLHL40Q2TBA0 621 aa19.48■□□□□ 0.71
PDLIM7-202ENST00000355841 FIBCD1Q8N539 461 aa19.48■□□□□ 0.71
PDLIM7-202ENST00000355841 RDH13Q8NBN7 331 aa19.48■□□□□ 0.71
PDLIM7-202ENST00000355841 CPSF3Q9UKF6 684 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-202ENST00000355841 TRIM49BA6NDI0 452 aa19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 PDXKO00764 312 aa19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 TAP1Q03518 808 aa19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 RNASELQ05823 741 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 SPOUT1Q5T280 376 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 PPP2R2DQ66LE6 453 aa19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 RBM43Q6ZSC3 357 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 CBWD2Q8IUF1 395 aa19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 TRIML1Q8N9V2 468 aa19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 URGCPQ8TCY9 931 aa19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 SNX27Q96L92 541 aa19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 ZMAT2Q96NC0 199 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 RPS6KC1Q96S38 1066 aa19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 RPF1Q9H9Y2 349 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 SLC28A3Q9HAS3 691 aa19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 TOPORSQ9NS56 1045 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 CACNG4Q9UBN1 327 aa19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 FNDC1Q4ZHG4 1894 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-202ENST00000355841 EXTL3O43909 919 aa19.46■□□□□ 0.71
PDLIM7-202ENST00000355841 DDHD2O94830 711 aa19.46■□□□□ 0.71
PDLIM7-202ENST00000355841 NR3C1P04150 777 aa19.46■□□□□ 0.71
PDLIM7-202ENST00000355841 LINC00271P0C7V0 271 aa19.46■□□□□ 0.71
PDLIM7-202ENST00000355841 WNT7BP56706 349 aa19.46■□□□□ 0.71
PDLIM7-202ENST00000355841 DPCR1Q3MIW9 517 aa19.46■□□□□ 0.71
PDLIM7-202ENST00000355841 ZCWPW2Q504Y3 356 aa19.46■□□□□ 0.71
PDLIM7-202ENST00000355841 COBLL1Q53SF7 1204 aa19.46■□□□□ 0.71
PDLIM7-202ENST00000355841 ALKAL1Q6UXT8 129 aa19.46■□□□□ 0.71
PDLIM7-202ENST00000355841 LRRC43Q8N309 656 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms