RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PTPRHQ9HD43 1115 aa18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 BLOC1S4Q9NUP1 217 aa18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 CLIC4Q9Y696 253 aa18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 DOCK8Q8NF50 2099 aa18.43■□□□□ 0.54
PDLIM7-201ENST00000355572 CCDC169A6NNP5 214 aa18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 TEX28O15482 410 aa18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 KIF4AO95239 1232 aa18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 HERC4Q5GLZ8 1057 aaPredicted RBP18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 ARL6IP4Q66PJ3 421 aaKnown RBP18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 CD300LGQ6UXG3 332 aa18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 CABP7Q86V35 215 aa18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 IFT74Q96LB3 600 aa18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 ACO2Q99798 780 aaKnown RBP18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 HAPLN2Q9GZV7 340 aa18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 ADAM7Q9H2U9 754 aa18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 GOLGA2P5Q9HBQ8 144 aa18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 CHST7Q9NS84 486 aa18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 PHLPP2Q6ZVD8 1323 aa18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 ZMYM2Q9UBW7 1377 aa18.42■□□□□ 0.54
PDLIM7-201ENST00000355572 PLA2G4BP0C869 781 aa18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 RPL17P18621 184 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 GUCY2CP25092 1073 aa18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 DSG1Q02413 1049 aa18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 SOX4Q06945 474 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 KARSQ15046 597 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 SPECC1Q5M775 1068 aa18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 PRSS55Q6UWB4 352 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 TMC5Q6UXY8 1006 aa18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 GLYCTKQ8IVS8 523 aa18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 RPS6KC1Q96S38 1066 aa18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 POP1Q99575 1024 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 SMOC2Q9H3U7 446 aa18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 TNFSF13BQ9Y275 285 aa18.41■□□□□ 0.54
PDLIM7-201ENST00000355572 ZNF318Q5VUA4 2279 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 NOTCH4Q99466 2003 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 FSD2A1L4K1 749 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 C2CD4DB7Z1M9 353 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 K7ERI5 159 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 SPATA31D3P0C874 917 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 HOXB8P17481 243 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 SYT1P21579 422 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 PROZP22891 400 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 KLRC2P26717 231 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 OSTNP61366 133 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 TUSC3Q13454 348 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 TMEM132AQ24JP5 1023 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 SEZ6Q53EL9 994 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 RTP2Q5QGT7 225 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 SPATA31D4Q6ZUB0 917 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 ZBTB33Q86T24 672 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 FBXL18Q96ME1 805 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 ZMAT2Q96NC0 199 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 PPP1R10Q96QC0 940 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 TMEM134Q9H6X4 195 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 RXFP1Q9HBX9 757 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 KMT5AQ9NQR1 393 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 MRPL17Q9NRX2 175 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 ADAM28Q9UKQ2 775 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 STK24Q9Y6E0 443 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 TRIOO75962 3097 aa18.4■□□□□ 0.54
PDLIM7-201ENST00000355572 URODP06132 367 aa18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 SRGAP2BP0DMP2 458 aa18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 PLCG1P19174 1290 aa18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 GLUD2P49448 558 aa18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 EFNA5P52803 228 aa18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 DMP1Q13316 513 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 GIT2Q14161 759 aa18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 MCM6Q14566 821 aa18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 HSP90AA2PQ14568 343 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 BRAPQ7Z569 592 aa18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 HACE1Q8IYU2 909 aa18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 C3orf58Q8NDZ4 430 aa18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 TMEM161BQ8NDZ6 487 aa18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 COLEC11Q9BWP8 271 aa18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 MTMR6Q9Y217 621 aa18.39■□□□□ 0.53
PDLIM7-201ENST00000355572 CARNS1A5YM72 827 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 PRR33A8MZF0 331 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 ADAM12O43184 909 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 RFPL2O75678 378 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 THP07101 528 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 ALADP13716 330 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 PLS3P13797 630 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 MARCKSP29966 332 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 DHX8Q14562 1220 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 DCAF4L1Q3SXM0 396 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 ZNF568Q3ZCX4 644 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 TPRNQ4KMQ1 711 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 KIAA1841Q6NSI8 718 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 ALKAL1Q6UXT8 129 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 HFE2Q6ZVN8 426 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 EPSTI1Q96J88 318 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 DRC1Q96MC2 740 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 REEP2Q9BRK0 252 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 ADPGKQ9BRR6 497 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 NTPCRQ9BSD7 190 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 MAN1C1Q9NR34 630 aa18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 FBXO2Q9UK22 296 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-201ENST00000355572 MAPTP10636 758 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-201ENST00000355572 HARSP12081 509 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-201ENST00000355572 GRM5P41594 1212 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms