RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TMEM161AQ9NX61 479 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 ZFATQ9P243 1243 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 ATP10AO60312 1499 aa15.71■□□□□ 0.1
LMX1B-201ENST00000355497 POTECB2RU33 542 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 ANKMY2Q8IV38 441 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 A8MXQ7 604 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 TCP11X1B4DZS4 312 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 P4HBP07237 508 aaKnown RBP15.7■□□□□ 0.1
LMX1B-201ENST00000355497 BTBD8Q5XKL5 378 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 LONP2Q86WA8 852 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 DCUN1D1Q96GG9 259 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 ALG13Q9NP73 1137 aaKnown RBP15.7■□□□□ 0.1
LMX1B-201ENST00000355497 HOXC10Q9NYD6 342 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 KRT87PA6NCN2 255 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 AP3B1O00203 1094 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 FOXP2O15409 715 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 NBNO60934 754 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 RALAP11233 206 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 EIF3EP60228 445 aaKnown RBP15.7■□□□□ 0.1
LMX1B-201ENST00000355497 DNAL1Q4LDG9 190 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 PID1Q7Z2X4 250 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 DYRK4Q9NR20 520 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 ADGRG1Q9Y653 693 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 HNRNPRO43390 633 aaKnown RBP15.7■□□□□ 0.1
LMX1B-201ENST00000355497 AKAP10O43572 662 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 KIF1CO43896 1103 aaKnown RBP15.7■□□□□ 0.1
LMX1B-201ENST00000355497 ADCY3O60266 1144 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 SRP72O76094 671 aaKnown RBP15.7■□□□□ 0.1
LMX1B-201ENST00000355497 KRT16P08779 473 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 SLC1A1P43005 524 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 C16orf89Q6UX73 402 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 ZNF556Q9HAH1 456 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 SMG5Q9UPR3 1016 aaKnown RBP15.7■□□□□ 0.1
LMX1B-201ENST00000355497 H0YC42 278 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 AGTP01019 485 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 ATP1A1P05023 1023 aaKnown RBP15.7■□□□□ 0.1
LMX1B-201ENST00000355497 ZNF467Q7Z7K2 595 aaPredicted RBP15.7■□□□□ 0.1
LMX1B-201ENST00000355497 STRBPQ96SI9 672 aaKnown RBP15.7■□□□□ 0.1
LMX1B-201ENST00000355497 KIAA0556O60303 1618 aa15.7■□□□□ 0.1
LMX1B-201ENST00000355497 GUCY1A3Q02108 690 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 NBPF20Q3BBV1 942 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 NSUN6Q8TEA1 469 aaKnown RBP15.69■□□□□ 0.1
LMX1B-201ENST00000355497 BTN2A2Q8WVV5 523 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 PGBD4Q96DM1 585 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 SIK2Q9H0K1 926 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 FAM32AQ9Y421 112 aaKnown RBP15.69■□□□□ 0.1
LMX1B-201ENST00000355497 ATP7AQ04656 1500 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 ORC4O43929 436 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 MYCP01106 439 aaPredicted RBP15.69■□□□□ 0.1
LMX1B-201ENST00000355497 LCP1P13796 627 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 NUP93Q8N1F7 819 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 MRPL1Q9BYD6 325 aaKnown RBP15.69■□□□□ 0.1
LMX1B-201ENST00000355497 CLCA2Q9UQC9 943 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 TOB2Q14106 344 aaPredicted RBP15.69■□□□□ 0.1
LMX1B-201ENST00000355497 KYAT1Q16773 422 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 SYTL3Q4VX76 610 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 RTKN2Q8IZC4 609 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 PLEKHA5Q9HAU0 1116 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 STXBP3O00186 592 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 STAT3P40763 770 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 QARSP47897 775 aaKnown RBP15.69■□□□□ 0.1
LMX1B-201ENST00000355497 ACTR2P61160 394 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 CYGBQ8WWM9 190 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 BLOC1S6Q9UL45 172 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 PITPNM2Q9BZ72 1349 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 AATKQ6ZMQ8 1374 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 MYO1GB0I1T2 1018 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 PSMD3O43242 534 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 PDAP1Q13442 181 aaKnown RBP15.69■□□□□ 0.1
LMX1B-201ENST00000355497 SNRNP48Q6IEG0 339 aaKnown RBP15.69■□□□□ 0.1
LMX1B-201ENST00000355497 TBC1D10CQ8IV04 446 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 CLEC4FQ8N1N0 589 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 TMA16Q96EY4 203 aaKnown RBP15.69■□□□□ 0.1
LMX1B-201ENST00000355497 AGPAT1Q99943 283 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 DDX50Q9BQ39 737 aaKnown RBP15.69■□□□□ 0.1
LMX1B-201ENST00000355497 TMEM47Q9BQJ4 181 aa15.69■□□□□ 0.1
LMX1B-201ENST00000355497 ABT1Q9ULW3 272 aaKnown RBP15.69■□□□□ 0.1
LMX1B-201ENST00000355497 PRAMEF22A3QJZ6 481 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 TLR2O60603 784 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 CEP78Q5JTW2 689 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 SWSAP1Q6NVH7 229 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 ATL2Q8NHH9 583 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 SH3GL2Q99962 352 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 TBC1D23Q9NUY8 699 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 TMEM260Q9NX78 707 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 GABBR1Q9UBS5 961 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 WDR62O43379 1518 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 CCDC78A2IDD5 438 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 USP17L15C9J2P7 530 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 USP17L13C9JLJ4 530 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 USP17L11C9JVI0 530 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 USP17L18D6R9N7 530 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 USP17L22D6RA61 530 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 USP17L17D6RBQ6 530 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 USP17L19D6RCP7 530 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 USP17L20D6RJB6 530 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 RTN2O75298 545 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 KCNQ4P56696 695 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 CDK17Q00537 523 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 USP17L24Q0WX57 530 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms