RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 DGAT1O75907 488 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 FBXO38Q6PIJ6 1188 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 TADA2BQ86TJ2 420 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 ATP11CQ8NB49 1132 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 ZNF280CQ8ND82 737 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 AGPAT1Q99943 283 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 PFASO15067 1338 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 FLT1P17948 1338 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 GRID2IPA4D2P6 1211 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 SNAPC2Q13487 334 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 RNF168Q8IYW5 571 aaPredicted RBP19.07■□□□□ 0.64
COL18A1-202ENST00000355480 KATNAL1Q9BW62 490 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.07■□□□□ 0.64
COL18A1-202ENST00000355480 FAM95CA0A1B0GW59 222 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 C19orf81C9J6K1 198 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 TYK2P29597 1187 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 ATP6V1E1P36543 226 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 CDC42EP1Q00587 391 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 ACBD5Q5T8D3 534 aaPredicted RBP19.07■□□□□ 0.64
COL18A1-202ENST00000355480 SMARCAD1Q9H4L7 1026 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 ESYT3A0FGR9 886 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 PDXKO00764 312 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 GUCY1A2P33402 732 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 EFTUD2Q15029 972 aaKnown RBP eCLIP19.07■□□□□ 0.642e-7■■■■□ 25.5
COL18A1-202ENST00000355480 PGBD4Q96DM1 585 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 TIPINQ9BVW5 301 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 HSPBP1Q9NZL4 362 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 AIPL1Q9NZN9 384 aa19.07■□□□□ 0.64
COL18A1-202ENST00000355480 KIAA0391O15091 583 aaKnown RBP19.06■□□□□ 0.64
COL18A1-202ENST00000355480 ZNF543Q08ER8 600 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 IZUMO3Q5VZ72 239 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 SHC4Q6S5L8 630 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 ZNF467Q7Z7K2 595 aaPredicted RBP19.06■□□□□ 0.64
COL18A1-202ENST00000355480 TEKT4Q8WW24 435 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 MTIF3Q9H2K0 278 aaKnown RBP19.06■□□□□ 0.64
COL18A1-202ENST00000355480 DCTN4Q9UJW0 460 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 ZNF197O14709 1029 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 PRPF4O43172 522 aaKnown RBP eCLIP19.06■□□□□ 0.642e-7■■■□□ 18.3
COL18A1-202ENST00000355480 ATICP31939 592 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 PDIA5Q14554 519 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 DDIASQ8IXT1 998 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 PPP2R3CQ969Q6 453 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 PARK7Q99497 189 aaKnown RBP19.06■□□□□ 0.64
COL18A1-202ENST00000355480 FOXN1O15353 648 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 NDUFB10O96000 172 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 ACOT2P49753 483 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 PDXDC1Q6P996 788 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 NUDCD3Q8IVD9 361 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 DCUN1D1Q96GG9 259 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 HACL1Q9UJ83 578 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 ABCC3O15438 1527 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 UPP2O95045 317 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 VCPP55072 806 aaKnown RBP19.06■□□□□ 0.64
COL18A1-202ENST00000355480 RBP5P82980 135 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 ATXN7L3BQ96GX2 97 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 KCNA2P16389 499 aa19.06■□□□□ 0.64
COL18A1-202ENST00000355480 POLRMTO00411 1230 aaKnown RBP19.05■□□□□ 0.64
COL18A1-202ENST00000355480 ALDH1A1P00352 501 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 GH1P01241 217 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 PYGLP06737 847 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 SCP2P22307 547 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 TKFCQ3LXA3 575 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 ASAP3Q8TDY4 903 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 ZBTB12Q9Y330 459 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-202ENST00000355480 PFDN1O60925 122 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 BRAFP15056 766 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 ARSEP51690 589 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 EIF3EP60228 445 aaKnown RBP19.05■□□□□ 0.64
COL18A1-202ENST00000355480 SEPT1Q8WYJ6 367 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.05■□□□□ 0.64
COL18A1-202ENST00000355480 LSM7Q9UK45 103 aaKnown RBP19.05■□□□□ 0.64
COL18A1-202ENST00000355480 FAM187AA6NFU0 413 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 ASMTLO95671 621 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 ACTR2P61160 394 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 DEUP1Q05D60 604 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 BEND6Q5SZJ8 279 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-202ENST00000355480 C18orf8Q96DM3 657 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 MRPL40Q9NQ50 206 aaKnown RBP19.05■□□□□ 0.64
COL18A1-202ENST00000355480 PNMA6AP0CW24 399 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-202ENST00000355480 CYP2B6P20813 491 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 TMEM132DQ14C87 1099 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 ANGEL2Q5VTE6 544 aaKnown RBP19.05■□□□□ 0.64
COL18A1-202ENST00000355480 RAB42Q8N4Z0 105 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 CENPKQ9BS16 269 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 ASPSCR1Q9BZE9 553 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 ING2Q9H160 280 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 ADA2Q9NZK5 511 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 ZNF70Q9UC06 446 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-202ENST00000355480 SFMBT1Q9UHJ3 866 aa19.05■□□□□ 0.64
COL18A1-202ENST00000355480 HAUS5O94927 633 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 TRIM28Q13263 835 aaKnown RBP19.04■□□□□ 0.64
COL18A1-202ENST00000355480 RGS7P49802 495 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 SEMA3FQ13275 785 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 C1orf146Q5VVC0 180 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 PRR5LQ6MZQ0 368 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 MARCH10Q8NA82 808 aaPredicted RBP19.04■□□□□ 0.64
COL18A1-202ENST00000355480 KIFC3Q9BVG8 833 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 KIF17Q9P2E2 1029 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 HDAC6Q9UBN7 1215 aa19.04■□□□□ 0.64
COL18A1-202ENST00000355480 RTN2O75298 545 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms