RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ITGA8P53708 1063 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 THOC5Q13769 683 aaKnown RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 SUSD4Q5VX71 490 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 PHLDB3Q6NSJ2 640 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 GSTA5Q7RTV2 222 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 CFAP61Q8NHU2 1237 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 ATG4AQ8WYN0 398 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 HIC2Q96JB3 615 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 FAM118BQ9BPY3 351 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 CENPKQ9BS16 269 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 PREBQ9HCU5 417 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 ALG13Q9NP73 1137 aaKnown RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 GPCPD1Q9NPB8 672 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 PDP2Q9P2J9 529 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 COG5Q9UP83 839 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 RPS6KL1Q9Y6S9 549 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 MIF4GDA9UHW6 222 aaKnown RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 TROVE2P10155 538 aaKnown RBP eCLIP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 GJC1P36383 396 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 CPA2P48052 419 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 EIF6P56537 245 aaKnown RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 EVA1CP58658 441 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 SLC34A1Q06495 639 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 CCDC15Q0P6D6 951 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 KNOP1Q1ED39 458 aaKnown RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 LRRC36Q1X8D7 754 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 FOXB2Q5VYV0 432 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 CCDC62Q6P9F0 684 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 C4orf50Q6ZRC1 276 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 PALB2Q86YC2 1186 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 SLC7A6OSQ96CW6 309 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 DDX27Q96GQ7 796 aaKnown RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 OCEL1Q9H607 264 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 USP20Q9Y2K6 914 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 CCDC88AQ3V6T2 1871 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 KIF13BQ9NQT8 1826 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 TIAM2Q8IVF5 1701 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 POTEFA5A3E0 1075 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 ANKRD62A6NC57 917 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 TXNDC9O14530 226 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 TBCAO75347 108 aaKnown RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 HAUS5O94927 633 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 POTEIP0CG38 1075 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 ESRRAP11474 423 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 STAT3P40763 770 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 CYP2J2P51589 502 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 MAP7Q14244 749 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 PDIA5Q14554 519 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 EPHA7Q15375 998 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 CERKLQ49MI3 558 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 ACBD5Q5T8D3 534 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 OLFML2BQ68BL8 750 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 POTEGQ6S5H5 508 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 POTEEQ6S8J3 1075 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 SLC13A5Q86YT5 568 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 ENDOVQ8N8Q3 282 aaKnown RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 FAM161BQ96MY7 647 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 MTMR9Q96QG7 549 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 ZSWIM1Q9BR11 485 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 KCTD10Q9H3F6 313 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 VPS37BQ9H9H4 285 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 METTL14Q9HCE5 456 aaKnown RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 PCYOX1Q9UHG3 505 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 CCDC22O60826 627 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 ADAMTS2O95450 1211 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 GAS8O95995 478 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 CCNFP41002 786 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 YARSP54577 528 aaKnown RBP8.13□□□□□ -1.11
BRCA1-201ENST00000352993 WDR4P57081 412 aaKnown RBP8.13□□□□□ -1.11
BRCA1-201ENST00000352993 PPATQ06203 517 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 ACVR2BQ13705 512 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 CNPY1Q3B7I2 92 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 EDRF1Q3B7T1 1238 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 C6orf163Q5TEZ5 329 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 PPP4R3CPQ6ZMV5 832 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 CYFIP1Q7L576 1253 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 RHOT2Q8IXI1 618 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 FAM186BQ8IYM0 893 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 ARHGAP18Q8N392 663 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 LZTS2Q9BRK4 669 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 TRABDQ9H4I3 376 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 DNAAF2Q9NVR5 837 aaKnown RBP8.13□□□□□ -1.11
BRCA1-201ENST00000352993 CHMP2BQ9UQN3 213 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 DUOX1Q9NRD9 1551 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 TAF1LQ8IZX4 1826 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 TTC36A6NLP5 189 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 TBX10O75333 385 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 PSMG1O95456 288 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 FGRP09769 529 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 FAM200BP0CF97 657 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 TRIM49P0CI25 452 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 TRIM49CP0CI26 452 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 EAPPQ56P03 285 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-201ENST00000352993 ACSBG2Q5FVE4 666 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 IZUMO2Q6UXV1 221 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 CPNE8Q86YQ8 564 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 MAPKAPK5Q8IW41 473 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 TGFBRAP1Q8WUH2 860 aa8.13□□□□□ -1.11
BRCA1-201ENST00000352993 NMD3Q96D46 503 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms