RNA–Protein interactions for RNA: ENST00000349953.7

PARD3B-201, Transcript of par-3 family cell polarity regulator beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PARD3B, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-201ENST00000349953 SYCE1Q8N0S2 351 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 FBXL13Q8NEE6 735 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 ATP8B4Q8TF62 1192 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 CLMNQ96JQ2 1002 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 HERPUD2Q9BSE4 406 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 ACAD9Q9H845 621 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 ANKEF1Q9NU02 776 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 GPC5P78333 572 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 SNX1Q13596 522 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 EMC2Q15006 297 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 LY6KQ17RY6 165 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 DCAF15Q66K64 600 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 ZBTB33Q86T24 672 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 ZNF564Q8TBZ8 553 aaPredicted RBP12.5□□□□□ -0.41
PARD3B-201ENST00000349953 SHC3Q92529 594 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 DNAJC17Q9NVM6 304 aaKnown RBP12.5□□□□□ -0.41
PARD3B-201ENST00000349953 RLFQ13129 1914 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 PSAPP07602 524 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 TNFRSF8P28908 595 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 TNFSF9P41273 254 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 LIG4P49917 911 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 SEC24CP53992 1094 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 PLTPP55058 493 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 POU5F1Q01860 360 aaKnown RBP12.5□□□□□ -0.41
PARD3B-201ENST00000349953 PRUNE1Q86TP1 453 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 NCAPG2Q86XI2 1143 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 NT5C1BQ96P26 610 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 CAPS2Q9BXY5 557 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 TSPYL1Q9H0U9 437 aa12.5□□□□□ -0.41
PARD3B-201ENST00000349953 SPOPO43791 374 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 CSDE1O75534 798 aaKnown RBP12.49□□□□□ -0.41
PARD3B-201ENST00000349953 GLRA2P23416 452 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 CTNNA1P35221 906 aaKnown RBP12.49□□□□□ -0.41
PARD3B-201ENST00000349953 ZNF394Q53GI3 561 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 TDRD10Q5VZ19 366 aaKnown RBP12.49□□□□□ -0.41
PARD3B-201ENST00000349953 GPD1LQ8N335 351 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 LRRC71Q8N4P6 559 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 OR5B17Q8NGF7 314 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 SLC16A10Q8TF71 515 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 TRAPPC12Q8WVT3 735 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 ATG4AQ8WYN0 398 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 ATP6V0A1Q93050 837 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 GPRASP2Q96D09 838 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 TMEM8AQ9HCN3 771 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 KLHL11Q9NVR0 708 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 FBXO40Q9UH90 709 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 INTUQ9ULD6 942 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 SHBGP04278 402 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 GTF2A1P52655 376 aaPredicted RBP12.49□□□□□ -0.41
PARD3B-201ENST00000349953 OSTNP61366 133 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 DR1Q01658 176 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 TRIP13Q15645 432 aaPredicted RBP12.49□□□□□ -0.41
PARD3B-201ENST00000349953 GADL1Q6ZQY3 521 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 OTUD6AQ7L8S5 288 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 C12orf56Q8IXR9 622 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 PRELID2Q8N945 189 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 C1orf54Q8WWF1 131 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 DDX1Q92499 740 aaKnown RBP12.49□□□□□ -0.41
PARD3B-201ENST00000349953 VPS33BQ9H267 617 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 ATP6V0A4Q9HBG4 840 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 AS3MTQ9HBK9 375 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 APOBEC3GQ9HC16 384 aaKnown RBP12.49□□□□□ -0.41
PARD3B-201ENST00000349953 ZNF112Q9UJU3 913 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 AFG3L2Q9Y4W6 797 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 CLDN3O15551 220 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 GRIN3BO60391 1043 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 USP2O75604 605 aaPredicted RBP12.49□□□□□ -0.41
PARD3B-201ENST00000349953 RPS12P25398 132 aaKnown RBP12.49□□□□□ -0.41
PARD3B-201ENST00000349953 TMOD1P28289 359 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 PDE6CP51160 858 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 GPATCH11Q8N954 259 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 PCYT2Q99447 389 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 PDLIM7Q9NR12 457 aa12.49□□□□□ -0.41
PARD3B-201ENST00000349953 CNOT8Q9UFF9 292 aaKnown RBP12.49□□□□□ -0.41
PARD3B-201ENST00000349953 RGPD3A6NKT7 1758 aaPredicted RBP12.48□□□□□ -0.41
PARD3B-201ENST00000349953 RGPD4Q7Z3J3 1758 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 RTN2O75298 545 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 SUPT20HL2P0C7V6 817 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 UBA1P22314 1058 aaKnown RBP12.48□□□□□ -0.41
PARD3B-201ENST00000349953 RRM1P23921 792 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 MFAP3P55082 362 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 ZNF844Q08AG5 666 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 SUPT20HL1Q3ZLR7 823 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 WDR78Q5VTH9 848 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 CRELD2Q6UXH1 353 aaPredicted RBP12.48□□□□□ -0.41
PARD3B-201ENST00000349953 FBXO25Q8TCJ0 367 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 BCAS4Q8TDM0 211 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 CYFIP2Q96F07 1278 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 OTUD5Q96G74 571 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 ZSWIM1Q9BR11 485 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 ST6GALNAC4Q9H4F1 302 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 ELP3Q9H9T3 547 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 ZNF302Q9NR11 478 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 SYNGAP1Q96PV0 1343 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 ZNFX1Q9P2E3 1918 aaKnown RBP12.48□□□□□ -0.41
PARD3B-201ENST00000349953 SPATA31C2B4DYI2 1134 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 MYO1FO00160 1098 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 DGAT1O75907 488 aa12.48□□□□□ -0.41
PARD3B-201ENST00000349953 ARIH2O95376 493 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms