RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ZNF354CQ86Y25 554 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 ANKRD13AQ8IZ07 590 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 SCFD1Q8WVM8 642 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 RNF25Q96BH1 459 aaPredicted RBP15.68■□□□□ 0.1
NUP50-201ENST00000347635 SAAL1Q96ER3 474 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 SGSM3Q96HU1 749 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 PNMA5Q96PV4 448 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 KCND2Q9NZV8 630 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 CD58P19256 250 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 QARSP47897 775 aaKnown RBP15.68■□□□□ 0.1
NUP50-201ENST00000347635 MTMR2Q13614 643 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 KCTD17Q8N5Z5 321 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 ATL2Q8NHH9 583 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 FAM193BQ96PV7 902 aaPredicted RBP15.68■□□□□ 0.1
NUP50-201ENST00000347635 INO80BQ9C086 356 aaPredicted RBP15.68■□□□□ 0.1
NUP50-201ENST00000347635 AIPL1Q9NZN9 384 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 COMMD10Q9Y6G5 202 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 RNF225M0QZC1 329 aaPredicted RBP15.68■□□□□ 0.1
NUP50-201ENST00000347635 MED24O75448 989 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 RASIP1Q5U651 963 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 ANKRD36BP1Q96IX9 119 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 THAP2Q9H0W7 228 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 ANGPTL2Q9UKU9 493 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 TTC7AQ9ULT0 858 aaPredicted RBP15.68■□□□□ 0.1
NUP50-201ENST00000347635 DENND3A2RUS2 1198 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 INO80B-WBP1J3KQ70 363 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 SPAG7O75391 227 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 SLC25A27O95847 323 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 SLC1A1P43005 524 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 MAPK7Q13164 816 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 MTERF2Q49AM1 385 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 XRRA1Q6P2D8 792 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 ENOSF1Q7L5Y1 443 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 SAMD3Q8N6K7 520 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 HSPBP1Q9NZL4 362 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 HAUS6Q7Z4H7 955 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 FBXL13Q8NEE6 735 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 MAML1Q92585 1016 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 RPS6KC1Q96S38 1066 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 TULP2O00295 520 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 WNT7AO00755 349 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 TLR3O15455 904 aaKnown RBP15.67■□□□□ 0.1
NUP50-201ENST00000347635 LDHAP00338 332 aaKnown RBP15.67■□□□□ 0.1
NUP50-201ENST00000347635 CPP00450 1065 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 RBBP5Q15291 538 aaKnown RBP15.67■□□□□ 0.1
NUP50-201ENST00000347635 CYFIP1Q7L576 1253 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 CDKL2Q92772 493 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 FAM213AQ9BRX8 229 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 CALN1Q9BXU9 219 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 KIAA1586Q9HCI6 787 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 AFDNP55196 1824 aaKnown RBP15.67■□□□□ 0.1
NUP50-201ENST00000347635 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 MED7O43513 233 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 SERPINB6P35237 376 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 SCTRP47872 440 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 KLHL38Q2WGJ6 581 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 CEP55Q53EZ4 464 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 FAM83AQ86UY5 434 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 MSTO1Q9BUK6 570 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 ATP6V0A4Q9HBG4 840 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 CHD2O14647 1828 aaKnown RBP15.67■□□□□ 0.1
NUP50-201ENST00000347635 TMEM120BA0PK00 339 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 GYG2O15488 501 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 ITIH4Q14624 930 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 TMEM270Q6UE05 265 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 CFAP36Q96G28 342 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 PARK7Q99497 189 aaKnown RBP15.67■□□□□ 0.1
NUP50-201ENST00000347635 RTFDC1Q9BY42 306 aaPredicted RBP15.67■□□□□ 0.1
NUP50-201ENST00000347635 ZWILCHQ9H900 591 aa15.67■□□□□ 0.1
NUP50-201ENST00000347635 ZNF142P52746 1687 aaPredicted RBP15.67■□□□□ 0.1
NUP50-201ENST00000347635 SMIM22K7EJ46 135 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 LRRC34Q8IZ02 419 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 ZBED8Q8IZ13 594 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 FAM163AQ96GL9 167 aaPredicted RBP15.66■□□□□ 0.1
NUP50-201ENST00000347635 YY1AP1Q9H869 796 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 BLOC1S4Q9NUP1 217 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.66■□□□□ 0.1
NUP50-201ENST00000347635 GPS1Q13098 491 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 TMEM119Q4V9L6 283 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 ERICH1Q86X53 443 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 SUGP1Q8IWZ8 645 aaKnown RBP15.66■□□□□ 0.1
NUP50-201ENST00000347635 POLR3CQ9BUI4 534 aaPredicted RBP15.66■□□□□ 0.1
NUP50-201ENST00000347635 RIOX1Q9H6W3 641 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 ELP3Q9H9T3 547 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 IP6K2Q9UHH9 426 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 MRC1P22897 1456 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 GOLGA8MH3BSY2 632 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 SCP2P22307 547 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 DDR1Q08345 913 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 GIT2Q14161 759 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 AFAP1L2Q8N4X5 818 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 TNFRSF25Q93038 417 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 HESX1Q9UBX0 185 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 CDH16O75309 829 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 COILP38432 576 aaPredicted RBP15.66■□□□□ 0.1
NUP50-201ENST00000347635 MAP7Q14244 749 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 PPP2R5DQ14738 602 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 RUSC1Q9BVN2 902 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 MRIQ9BWK5 157 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms