RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 VPS52Q8N1B4 723 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 MICAL1Q8TDZ2 1067 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 IFT74Q96LB3 600 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 NT5C3AQ9H0P0 336 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 ENTPD7Q9NQZ7 604 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 PARP2Q9UGN5 583 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 GIT1Q9Y2X7 761 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 N4BP3O15049 544 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 BMP15O95972 392 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 PPM1AP35813 382 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 UBA7P41226 1012 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 ALDH7A1P49419 539 aaKnown RBP17.66■□□□□ 0.42
RAB5C-201ENST00000346213 ZNF131P52739 623 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 PPP2R5AQ15172 486 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 SEZ6Q53EL9 994 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 LLGL2Q6P1M3 1020 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 URGCPQ8TCY9 931 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 DRC1Q96MC2 740 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 NTPCRQ9BSD7 190 aaKnown RBP17.66■□□□□ 0.42
RAB5C-201ENST00000346213 FGFBP2Q9BYJ0 223 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 TRIM6Q9C030 488 aaPredicted RBP17.66■□□□□ 0.42
RAB5C-201ENST00000346213 TLE6Q9H808 572 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 KMT5AQ9NQR1 393 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 GDAQ9Y2T3 454 aa17.66■□□□□ 0.42
RAB5C-201ENST00000346213 MBTPS2O43462 519 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 LILRB3O75022 631 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 NCKAP1LP55160 1127 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 DMP1Q13316 513 aaPredicted RBP17.65■□□□□ 0.42
RAB5C-201ENST00000346213 PTPN14Q15678 1187 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 TPRNQ4KMQ1 711 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 GLRA4Q5JXX5 417 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 SLC39A4Q6P5W5 647 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 TMC7Q7Z402 723 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 DDX53Q86TM3 631 aaKnown RBP17.65■□□□□ 0.42
RAB5C-201ENST00000346213 MRPL43Q8N983 215 aaKnown RBP17.65■□□□□ 0.42
RAB5C-201ENST00000346213 CNNM3Q8NE01 707 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 SPIRE2Q8WWL2 714 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 CDK5RAP3Q96JB5 506 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 PANK2Q9BZ23 570 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 TNFSF13BQ9Y275 285 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 MORC2Q9Y6X9 1032 aaPredicted RBP17.65■□□□□ 0.42
RAB5C-201ENST00000346213 TRIOO75962 3097 aa17.65■□□□□ 0.42
RAB5C-201ENST00000346213 TISP43B9A030 160 aa17.64■□□□□ 0.42
RAB5C-201ENST00000346213 K7ERI5 159 aa17.64■□□□□ 0.42
RAB5C-201ENST00000346213 CLASP2O75122 1294 aaKnown RBP17.64■□□□□ 0.42
RAB5C-201ENST00000346213 EFNA5P52803 228 aa17.64■□□□□ 0.42
RAB5C-201ENST00000346213 SOX4Q06945 474 aaPredicted RBP17.64■□□□□ 0.42
RAB5C-201ENST00000346213 ZBTB41Q5SVQ8 909 aa17.64■□□□□ 0.42
RAB5C-201ENST00000346213 SYCE2Q6PIF2 218 aa17.64■□□□□ 0.42
RAB5C-201ENST00000346213 CD300LGQ6UXG3 332 aa17.64■□□□□ 0.42
RAB5C-201ENST00000346213 ZBTB33Q86T24 672 aa17.64■□□□□ 0.42
RAB5C-201ENST00000346213 KCNG4Q8TDN1 519 aa17.64■□□□□ 0.42
RAB5C-201ENST00000346213 LARP4BQ92615 738 aaKnown RBP17.64■□□□□ 0.42
RAB5C-201ENST00000346213 TMEM169Q96HH4 297 aa17.64■□□□□ 0.42
RAB5C-201ENST00000346213 ZMAT2Q96NC0 199 aaKnown RBP17.64■□□□□ 0.42
RAB5C-201ENST00000346213 APOL5Q9BWW9 433 aa17.64■□□□□ 0.42
RAB5C-201ENST00000346213 GPR62Q9BZJ7 368 aa17.64■□□□□ 0.42
RAB5C-201ENST00000346213 TMEM134Q9H6X4 195 aa17.64■□□□□ 0.42
RAB5C-201ENST00000346213 GOLGA2P5Q9HBQ8 144 aa17.64■□□□□ 0.42
RAB5C-201ENST00000346213 MYMKA6NI61 221 aa17.64■□□□□ 0.41
RAB5C-201ENST00000346213 CTSAP10619 480 aa17.64■□□□□ 0.41
RAB5C-201ENST00000346213 NMT1P30419 496 aaKnown RBP17.64■□□□□ 0.41
RAB5C-201ENST00000346213 OR1G1P47890 313 aa17.64■□□□□ 0.41
RAB5C-201ENST00000346213 OSTNP61366 133 aa17.64■□□□□ 0.41
RAB5C-201ENST00000346213 AXDND1Q5T1B0 1012 aaPredicted RBP17.64■□□□□ 0.41
RAB5C-201ENST00000346213 FAM178BQ8IXR5 827 aa17.64■□□□□ 0.41
RAB5C-201ENST00000346213 SMRP1Q8NCR6 262 aa17.64■□□□□ 0.41
RAB5C-201ENST00000346213 HASPINQ8TF76 798 aa17.64■□□□□ 0.41
RAB5C-201ENST00000346213 DNAJC19Q96DA6 116 aa17.64■□□□□ 0.41
RAB5C-201ENST00000346213 CALML4Q96GE6 196 aa17.64■□□□□ 0.41
RAB5C-201ENST00000346213 TMEM175Q9BSA9 504 aa17.64■□□□□ 0.41
RAB5C-201ENST00000346213 CASTOR2A6NHX0 329 aa17.63■□□□□ 0.41
RAB5C-201ENST00000346213 KIF4AO95239 1232 aa17.63■□□□□ 0.41
RAB5C-201ENST00000346213 EPCAMP16422 314 aa17.63■□□□□ 0.41
RAB5C-201ENST00000346213 NDUFV1P49821 464 aa17.63■□□□□ 0.41
RAB5C-201ENST00000346213 STK38Q15208 465 aa17.63■□□□□ 0.41
RAB5C-201ENST00000346213 SHC4Q6S5L8 630 aa17.63■□□□□ 0.41
RAB5C-201ENST00000346213 C3orf58Q8NDZ4 430 aa17.63■□□□□ 0.41
RAB5C-201ENST00000346213 S1PR5Q9H228 398 aa17.63■□□□□ 0.41
RAB5C-201ENST00000346213 TSPY26PQ9H489 355 aa17.63■□□□□ 0.41
RAB5C-201ENST00000346213 UBN1Q9NPG3 1134 aa17.63■□□□□ 0.41
RAB5C-201ENST00000346213 FAN1Q9Y2M0 1017 aa17.63■□□□□ 0.41
RAB5C-201ENST00000346213 HCFC2Q9Y5Z7 792 aa17.63■□□□□ 0.41
RAB5C-201ENST00000346213 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.62■□□□□ 0.41
RAB5C-201ENST00000346213 SLC26A4O43511 780 aa17.62■□□□□ 0.41
RAB5C-201ENST00000346213 FAM189A1O60320 539 aa17.62■□□□□ 0.41
RAB5C-201ENST00000346213 CXCL14O95715 111 aa17.62■□□□□ 0.41
RAB5C-201ENST00000346213 KRT17Q04695 432 aa17.62■□□□□ 0.41
RAB5C-201ENST00000346213 NCBP1Q09161 790 aaKnown RBP17.62■□□□□ 0.41
RAB5C-201ENST00000346213 GRIK3Q13003 919 aa17.62■□□□□ 0.41
RAB5C-201ENST00000346213 E2F4Q16254 413 aa17.62■□□□□ 0.41
RAB5C-201ENST00000346213 AAK1Q2M2I8 961 aa17.62■□□□□ 0.41
RAB5C-201ENST00000346213 ZNF568Q3ZCX4 644 aa17.62■□□□□ 0.41
RAB5C-201ENST00000346213 ZC2HC1CQ53FD0 456 aaPredicted RBP17.62■□□□□ 0.41
RAB5C-201ENST00000346213 ALKAL1Q6UXT8 129 aa17.62■□□□□ 0.41
RAB5C-201ENST00000346213 KRI1Q8N9T8 703 aaKnown RBP17.62■□□□□ 0.41
RAB5C-201ENST00000346213 PPP1R10Q96QC0 940 aaKnown RBP17.62■□□□□ 0.41
RAB5C-201ENST00000346213 TIPINQ9BVW5 301 aa17.62■□□□□ 0.41
RAB5C-201ENST00000346213 RBSNQ9H1K0 784 aa17.62■□□□□ 0.41
RAB5C-201ENST00000346213 NUP62CLQ9H1M0 184 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms