RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SYN2Q92777 582 aaPredicted RBP10.04□□□□□ -0.8
ATG4A-202ENST00000345734 JAKMIP2Q96AA8 810 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 TMEM143Q96AN5 459 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 DUSP10Q9Y6W6 482 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 GTPBP10A4D1E9 387 aaKnown RBP10.03□□□□□ -0.8
ATG4A-202ENST00000345734 CELF2O95319 508 aaKnown RBP10.03□□□□□ -0.8
ATG4A-202ENST00000345734 IPO7O95373 1038 aaKnown RBP10.03□□□□□ -0.8
ATG4A-202ENST00000345734 SERPING1P05155 500 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 TGFB3P10600 412 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 CETPP11597 493 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 TCF7P36402 384 aaPredicted RBP10.03□□□□□ -0.8
ATG4A-202ENST00000345734 POLGP54098 1239 aaPredicted RBP10.03□□□□□ -0.8
ATG4A-202ENST00000345734 SPA17Q15506 151 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 TDRD12Q587J7 1177 aaKnown RBP10.03□□□□□ -0.8
ATG4A-202ENST00000345734 SLC39A4Q6P5W5 647 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 METTL7BQ6UX53 244 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 MAP4K3Q8IVH8 894 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 XXYLT1Q8NBI6 393 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 SLC17A8Q8NDX2 589 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 GPRC5AQ8NFJ5 357 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 PLEKHO2Q8TD55 490 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 COPS5Q92905 334 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 CEP89Q96ST8 783 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 NTPCRQ9BSD7 190 aaKnown RBP10.03□□□□□ -0.8
ATG4A-202ENST00000345734 NUCKS1Q9H1E3 243 aaKnown RBP10.03□□□□□ -0.8
ATG4A-202ENST00000345734 HAUS4Q9H6D7 363 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 MLXIPQ9HAP2 919 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 C17orf75Q9HAS0 396 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 GBA2Q9HCG7 927 aaPredicted RBP10.03□□□□□ -0.8
ATG4A-202ENST00000345734 KCNG1Q9UIX4 513 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 PCDHA13Q9Y5I0 950 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 ANKRD33BA6NCL7 494 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 ICMTO60725 284 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 LCA5LO95447 670 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 ADRB2P07550 413 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 CNGA1P29973 690 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 STAT5BP51692 787 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 GTF2A2P52657 109 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 VAV2P52735 878 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 PPP2R5AQ15172 486 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 ASIC2Q16515 512 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 SLC9C1Q4G0N8 1177 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 C1orf220Q5T0J3 134 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 IQCEQ6IPM2 695 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 SHCBP1Q8NEM2 672 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 ASAP3Q8TDY4 903 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 TMEM174Q8WUU8 243 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 SEPT1Q8WYJ6 367 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 SAAL1Q96ER3 474 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 ERO1AQ96HE7 468 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 MPHOSPH6Q99547 160 aaKnown RBP10.03□□□□□ -0.8
ATG4A-202ENST00000345734 CARD6Q9BX69 1037 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 NIFKQ9BYG3 293 aaKnown RBP10.03□□□□□ -0.8
ATG4A-202ENST00000345734 IFIH1Q9BYX4 1025 aaKnown RBP10.03□□□□□ -0.8
ATG4A-202ENST00000345734 PDGFCQ9NRA1 345 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 AIPL1Q9NZN9 384 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 CGNQ9P2M7 1197 aaKnown RBP10.03□□□□□ -0.8
ATG4A-202ENST00000345734 USP20Q9Y2K6 914 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 MRFAP1Q9Y605 127 aa10.03□□□□□ -0.8
ATG4A-202ENST00000345734 SSU72P8A0A1W2PR75 194 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 PNMA6AP0CW24 399 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-202ENST00000345734 KRT13P13646 458 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 MARK3P27448 753 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 VAMP7P51809 220 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 JAM2P57087 298 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 RTP1P59025 263 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 MYL7Q01449 175 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 HSDL1Q3SXM5 330 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 CELF3Q5SZQ8 465 aaKnown RBP10.02□□□□□ -0.81
ATG4A-202ENST00000345734 ZNF662Q6ZS27 426 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 INTS8Q75QN2 995 aaKnown RBP10.02□□□□□ -0.81
ATG4A-202ENST00000345734 IRF2BP2Q7Z5L9 587 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 CBWD2Q8IUF1 395 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 CCDC116Q8IYX3 515 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 HVCN1Q96D96 273 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 MRGPRX2Q96LB1 330 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 IFT74Q96LB3 600 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 SPAG5Q96R06 1193 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 GPR20Q99678 358 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 DHX33Q9H6R0 707 aaKnown RBP10.02□□□□□ -0.81
ATG4A-202ENST00000345734 MYO1AQ9UBC5 1043 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 EXOC7Q9UPT5 735 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 DOCK3Q8IZD9 2030 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 EVPLQ92817 2033 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 EMSYQ7Z589 1322 aa10.02□□□□□ -0.81
ATG4A-202ENST00000345734 MACROD2A1Z1Q3 448 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 CTAGE9A4FU28 777 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 KRT86O43790 486 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 LRRN2O75325 713 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 TFRCP02786 760 aaKnown RBP10.01□□□□□ -0.81
ATG4A-202ENST00000345734 GLRA2P23416 452 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 MAGEA1P43355 309 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 GCLMP48507 274 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 SNRPFP62306 86 aaKnown RBP10.01□□□□□ -0.81
ATG4A-202ENST00000345734 PPP3CAQ08209 521 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 KLHL30Q0D2K2 578 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 TARBP2Q15633 366 aaKnown RBP10.01□□□□□ -0.81
ATG4A-202ENST00000345734 FAM160B1Q5W0V3 765 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 CCDC62Q6P9F0 684 aa10.01□□□□□ -0.81
ATG4A-202ENST00000345734 MORC4Q8TE76 937 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms