RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PTGISQ16647 500 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 WDR72Q3MJ13 1102 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 AGBL2Q5U5Z8 902 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 NXNQ6DKJ4 435 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 WDR59Q6PJI9 974 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 TRMT10CQ7L0Y3 403 aaKnown RBP7.65□□□□□ -1.19
VCAN-202ENST00000342785 TMEM139Q8IV31 216 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 ZDHHC15Q96MV8 337 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 CBWD1Q9BRT8 395 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 SNX25Q9H3E2 840 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 OSGEPQ9NPF4 335 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 DDX4Q9NQI0 724 aaKnown RBP7.65□□□□□ -1.19
VCAN-202ENST00000342785 MAP2K7O14733 419 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 CRCPO75575 148 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 COG2Q14746 738 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 CBWD2Q8IUF1 395 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.64□□□□□ -1.19
VCAN-202ENST00000342785 GLIS3Q8NEA6 775 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 OR6B3Q8NGW1 331 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 FBXO25Q8TCJ0 367 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 CCT6BQ92526 530 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 FAF2Q96CS3 445 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 OSBPL8Q9BZF1 889 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 TMEM117Q9H0C3 514 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 NOP53Q9NZM5 478 aaKnown RBP7.64□□□□□ -1.19
VCAN-202ENST00000342785 DBR1Q9UK59 544 aaKnown RBP7.64□□□□□ -1.19
VCAN-202ENST00000342785 H0Y3Z8 333 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 COPEO14579 308 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 GARSP41250 739 aaKnown RBP7.64□□□□□ -1.19
VCAN-202ENST00000342785 CORO7P57737 925 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 STAT4Q14765 748 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 MAP3K21Q5TCX8 1036 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 SLC13A5Q86YT5 568 aaPredicted RBP7.64□□□□□ -1.19
VCAN-202ENST00000342785 IRF2BP1Q8IU81 584 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 CREG2Q8IUH2 290 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 MTMR9Q96QG7 549 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 EHD4Q9H223 541 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 AIPL1Q9NZN9 384 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 DCTN4Q9UJW0 460 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 TRAF3IP3Q9Y228 551 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 EPHB6O15197 1021 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 TOM1L1O75674 476 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 PEX19P40855 299 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 ARSEP51690 589 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 STAT5BP51692 787 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 BCAR1P56945 870 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 ASPHQ12797 758 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 LONRF1Q17RB8 773 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 MEI1Q5TIA1 1274 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 CATSPER4Q7RTX7 472 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 ZNF720Q7Z2F6 126 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 PPM1NQ8N819 430 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 BCAP29Q9UHQ4 241 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 GPC4O75487 556 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 DCTN3O75935 186 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 KRT38O76015 456 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 ABL1P00519 1130 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 TMPRSS15P98073 1019 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 MAPK7Q13164 816 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 TAF11Q15544 211 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 IL17AQ16552 155 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 RNF149Q8NC42 400 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 CYFIP2Q96F07 1278 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 SCYL1Q96KG9 808 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 LRRC37BQ96QE4 947 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 FAM118BQ9BPY3 351 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 TRAIPQ9BWF2 469 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 PABPC3Q9H361 631 aaKnown RBP7.64□□□□□ -1.19
VCAN-202ENST00000342785 GPRC5CQ9NQ84 441 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 OLFML3Q9NRN5 406 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 ASNSD1Q9NWL6 643 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 GGT7Q9UJ14 662 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 SIK3Q9Y2K2 1263 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 HLA-DRAP01903 254 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 SDC4P31431 198 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 CIITAP33076 1130 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 RHBDL3P58872 404 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 RHPN2Q8IUC4 686 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 ATP11CQ8NB49 1132 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 RBBP8NLQ8NC74 664 aaPredicted RBP7.64□□□□□ -1.19
VCAN-202ENST00000342785 CFAP36Q96G28 342 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 GMCL1Q96IK5 515 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 GBP5Q96PP8 586 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 ZSWIM1Q9BR11 485 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 PI4K2AQ9BTU6 479 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 MRPL4Q9BYD3 311 aaKnown RBP7.64□□□□□ -1.19
VCAN-202ENST00000342785 KLC2Q9H0B6 622 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 TMEM8AQ9HCN3 771 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 KLC4Q9NSK0 619 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 PARVAQ9NVD7 372 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 KLHL11Q9NVR0 708 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 KIAA0391O15091 583 aaKnown RBP7.64□□□□□ -1.19
VCAN-202ENST00000342785 RGL2O15211 777 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 LUC7L3O95232 432 aaKnown RBP7.64□□□□□ -1.19
VCAN-202ENST00000342785 KRT3P12035 628 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 HSPA9P38646 679 aaKnown RBP7.64□□□□□ -1.19
VCAN-202ENST00000342785 TMEM119Q4V9L6 283 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 MAML1Q92585 1016 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 TAAR1Q96RJ0 339 aa7.64□□□□□ -1.19
VCAN-202ENST00000342785 KIFC3Q9BVG8 833 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms