RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 GINS2Q9Y248 185 aa11.37□□□□□ -0.59
TPM3-207ENST00000341372 SLC26A4O43511 780 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 CCT6AP40227 531 aaKnown RBP11.36□□□□□ -0.59
TPM3-207ENST00000341372 KRT79Q5XKE5 535 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 TMCO2Q7Z6W1 182 aaPredicted RBP11.36□□□□□ -0.59
TPM3-207ENST00000341372 RTN4RL1Q86UN2 441 aaPredicted RBP11.36□□□□□ -0.59
TPM3-207ENST00000341372 MYOCDQ8IZQ8 938 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 ZFRQ96KR1 1074 aaKnown RBP11.36□□□□□ -0.59
TPM3-207ENST00000341372 GUCD1Q96NT3 240 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 RAD9AQ99638 391 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 ZNF576Q9H609 170 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 PRKAG3Q9UGI9 489 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 CHD7Q9P2D1 2997 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 RALGAPA2Q2PPJ7 1873 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 A0A087WZ62 844 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 PP2D1A8MPX8 630 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 ASAP2O43150 1006 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 TLL1O43897 1013 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 MGEA5O60502 916 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 CA3P07451 260 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 HSP90AA1P07900 732 aaKnown RBP11.36□□□□□ -0.59
TPM3-207ENST00000341372 MYOGP15173 224 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 ARL2P36404 184 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 POU5F1BQ06416 359 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 RHPN2Q8IUC4 686 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 BAP1Q92560 729 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 TMEM143Q96AN5 459 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 CCDC74AQ96AQ1 378 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 SLC39A13Q96H72 371 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 FDXACB1Q9BRP7 624 aaPredicted RBP11.36□□□□□ -0.59
TPM3-207ENST00000341372 GCOM2Q9BZD3 368 aaPredicted RBP11.36□□□□□ -0.59
TPM3-207ENST00000341372 IFT122Q9HBG6 1241 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 MYO9BQ13459 2157 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 CDH23Q9H251 3354 aa11.36□□□□□ -0.59
TPM3-207ENST00000341372 VWA3AA6NCI4 1184 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 ARHGEF15O94989 841 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 POU3F3P20264 500 aaPredicted RBP11.35□□□□□ -0.59
TPM3-207ENST00000341372 LAMTOR4Q0VGL1 99 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 MXD4Q14582 209 aaPredicted RBP11.35□□□□□ -0.59
TPM3-207ENST00000341372 LINC01559Q495D7 138 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 FAM173BQ6P4H8 233 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 MCPH1Q8NEM0 835 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 PRPF31Q8WWY3 499 aaKnown RBP11.35□□□□□ -0.59
TPM3-207ENST00000341372 CCDC43Q96MW1 224 aaKnown RBP11.35□□□□□ -0.59
TPM3-207ENST00000341372 INO80BQ9C086 356 aaPredicted RBP11.35□□□□□ -0.59
TPM3-207ENST00000341372 RGS18Q9NS28 235 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 C1orf112Q9NSG2 853 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 STRIP2Q9ULQ0 834 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 INSL6Q9Y581 213 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 CLIC4Q9Y696 253 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 LCHNA4D1U4 455 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 C9IYK1 514 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 GIPC1O14908 333 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 USO1O60763 962 aaKnown RBP11.35□□□□□ -0.59
TPM3-207ENST00000341372 LONP1P36776 959 aaKnown RBP11.35□□□□□ -0.59
TPM3-207ENST00000341372 SARSP49591 514 aaKnown RBP11.35□□□□□ -0.59
TPM3-207ENST00000341372 TAP1Q03518 808 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 LONRF3Q496Y0 759 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 TMEM119Q4V9L6 283 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 SRGAP1Q7Z6B7 1085 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 NLRC5Q86WI3 1866 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 KSR1Q8IVT5 923 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 GPR152Q8TDT2 470 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 ZNF668Q96K58 619 aaPredicted RBP11.35□□□□□ -0.59
TPM3-207ENST00000341372 NLRP4Q96MN2 994 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 USP28Q96RU2 1077 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 NFKBIZQ9BYH8 718 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 SLC28A3Q9HAS3 691 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 DDX19AQ9NUU7 478 aaKnown RBP11.35□□□□□ -0.59
TPM3-207ENST00000341372 USP3Q9Y6I4 520 aa11.35□□□□□ -0.59
TPM3-207ENST00000341372 COL4A4P53420 1690 aaPredicted RBP11.34□□□□□ -0.59
TPM3-207ENST00000341372 FNDC1Q4ZHG4 1894 aaPredicted RBP11.34□□□□□ -0.59
TPM3-207ENST00000341372 A0A087WWV3 80 aa11.34□□□□□ -0.59
TPM3-207ENST00000341372 EYA4O95677 639 aa11.34□□□□□ -0.59
TPM3-207ENST00000341372 ZSCAN22P10073 491 aaPredicted RBP11.34□□□□□ -0.59
TPM3-207ENST00000341372 CYP11B2P19099 503 aa11.34□□□□□ -0.59
TPM3-207ENST00000341372 SFPQP23246 707 aaKnown RBP eCLIP11.34□□□□□ -0.59
TPM3-207ENST00000341372 GLRA2P23416 452 aa11.34□□□□□ -0.59
TPM3-207ENST00000341372 CDC25AP30304 524 aa11.34□□□□□ -0.59
TPM3-207ENST00000341372 GRB10Q13322 594 aa11.34□□□□□ -0.59
TPM3-207ENST00000341372 SH3PXD2AQ5TCZ1 1133 aa11.34□□□□□ -0.59
TPM3-207ENST00000341372 ASAP3Q8TDY4 903 aa11.34□□□□□ -0.59
TPM3-207ENST00000341372 ZNF689Q96CS4 500 aaPredicted RBP11.34□□□□□ -0.59
TPM3-207ENST00000341372 SCLT1Q96NL6 688 aa11.34□□□□□ -0.59
TPM3-207ENST00000341372 PNMA5Q96PV4 448 aa11.34□□□□□ -0.59
TPM3-207ENST00000341372 PRR14Q9BWN1 585 aa11.34□□□□□ -0.59
TPM3-207ENST00000341372 C1QTNF2Q9BXJ5 285 aa11.34□□□□□ -0.59
TPM3-207ENST00000341372 NT5C3AQ9H0P0 336 aa11.34□□□□□ -0.59
TPM3-207ENST00000341372 FBXO2Q9UK22 296 aaPredicted RBP11.34□□□□□ -0.59
TPM3-207ENST00000341372 LINC01553A4QN01 128 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 ARHGEF35A5YM69 484 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 ERVH48-1M5A8F1 160 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 F13A1P00488 732 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 PTENP60484 403 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 PSMA6P60900 246 aaKnown RBP11.33□□□□□ -0.6
TPM3-207ENST00000341372 FAM189BP81408 668 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 GRIN1Q05586 938 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 CAPSQ13938 189 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 GRIN2CQ14957 1233 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 PCBP1Q15365 356 aaKnown RBP eCLIP11.33□□□□□ -0.68e-7■■□□□ 13.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms