RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 AIPL1Q9NZN9 384 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 HERC5Q9UII4 1024 aaKnown RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 ZBTB5O15062 677 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 PPP1R11O60927 126 aaPredicted RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 SPATA31D3P0C874 917 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 TMEM62Q0P6H9 643 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 ACVR2BQ13705 512 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 KIAA1755Q5JYT7 1200 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 MFSD5Q6N075 450 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 SPATA31D4Q6ZUB0 917 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 FAM47EQ6ZV65 393 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 MIGA2Q7L4E1 593 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 ZNF571Q7Z3V5 609 aaPredicted RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 CROCCP2Q86T23 111 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 LRRC8CQ8TDW0 803 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 TBCKQ8TEA7 893 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 SCG3Q8WXD2 468 aaKnown RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 ARHGEF2Q92974 986 aaKnown RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 DCLRE1BQ9H816 532 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 TMEM260Q9NX78 707 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 FER1L6Q2WGJ9 1857 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 CCNT1O60563 726 aaKnown RBP16.42■□□□□ 0.22
LIMK2-203ENST00000340552 FGFR1OPO95684 399 aaKnown RBP16.42■□□□□ 0.22
LIMK2-203ENST00000340552 LONRF1Q17RB8 773 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 JAMLQ86YT9 394 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 NCSTNQ92542 709 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 INPP5DQ92835 1189 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 NAP1L3Q99457 506 aaPredicted RBP16.42■□□□□ 0.22
LIMK2-203ENST00000340552 ZNF510Q9Y2H8 683 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.42■□□□□ 0.22
LIMK2-203ENST00000340552 BRCA1P38398 1863 aaKnown RBP16.42■□□□□ 0.22
LIMK2-203ENST00000340552 LAD1O00515 517 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 T-ENOLP0DO92 83 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 SKIP12755 728 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 INHBCP55103 352 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 MTFR1Q15390 333 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 DBN1Q16643 649 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 KHDC1Q4VXA5 237 aaKnown RBP16.42■□□□□ 0.22
LIMK2-203ENST00000340552 DCAF12L1Q5VU92 463 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 SNX30Q5VWJ9 437 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 PPP1R18Q6NYC8 613 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 GLIS3Q8NEA6 775 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 HES6Q96HZ4 224 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 KCNK9Q9NPC2 374 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 STOML1Q9UBI4 398 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 CHKBQ9Y259 395 aa16.42■□□□□ 0.22
LIMK2-203ENST00000340552 MAGEA13PA6NCF6 341 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 F5H6K3 240 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 ATP5HO75947 161 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 CIAPIN1Q6FI81 312 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 TRIM42Q8IWZ5 723 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 SH3TC2Q8TF17 1288 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 VCX3BQ9H321 246 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 VCX3AQ9NNX9 186 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 NAGPAQ9UK23 515 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 TMCO1Q9UM00 188 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 CNTNAP1P78357 1384 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 PRPF4BQ13523 1007 aaKnown RBP16.41■□□□□ 0.22
LIMK2-203ENST00000340552 RASIP1Q5U651 963 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 ZNF449Q6P9G9 518 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 MTMR14Q8NCE2 650 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 DDX50Q9BQ39 737 aaKnown RBP16.41■□□□□ 0.22
LIMK2-203ENST00000340552 CARD9Q9H257 536 aa16.41■□□□□ 0.22
LIMK2-203ENST00000340552 PFASO15067 1338 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 CETN3O15182 167 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 GNA14O95837 355 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 RPL21P46778 160 aaKnown RBP16.4■□□□□ 0.22
LIMK2-203ENST00000340552 OCRLQ01968 901 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 LRRC63Q05C16 580 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 R3HDM1Q15032 1099 aaKnown RBP16.4■□□□□ 0.22
LIMK2-203ENST00000340552 C10orf76Q5T2E6 689 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 GUF1Q8N442 669 aaKnown RBP16.4■□□□□ 0.22
LIMK2-203ENST00000340552 LBHD1Q9BQE6 289 aaPredicted RBP16.4■□□□□ 0.22
LIMK2-203ENST00000340552 SPATA16Q9BXB7 569 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 RIC8AQ9NPQ8 531 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 METTL5Q9NRN9 209 aaKnown RBP16.4■□□□□ 0.22
LIMK2-203ENST00000340552 ARFGEF1Q9Y6D6 1849 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 POLGP54098 1239 aaPredicted RBP16.4■□□□□ 0.22
LIMK2-203ENST00000340552 USP46P62068 366 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 LRRC41Q15345 812 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 CCDC6Q16204 474 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 ALKBH5Q6P6C2 394 aaKnown RBP16.4■□□□□ 0.22
LIMK2-203ENST00000340552 RFWD3Q6PCD5 774 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 IRF2BP2Q7Z5L9 587 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 GMCL1P1Q8NEA9 526 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 PDP2Q9P2J9 529 aa16.4■□□□□ 0.22
LIMK2-203ENST00000340552 TTC7AQ9ULT0 858 aaPredicted RBP16.4■□□□□ 0.22
LIMK2-203ENST00000340552 FAM187AA6NFU0 413 aa16.39■□□□□ 0.21
LIMK2-203ENST00000340552 NFKBIEO00221 500 aa16.39■□□□□ 0.21
LIMK2-203ENST00000340552 EYA4O95677 639 aa16.39■□□□□ 0.21
LIMK2-203ENST00000340552 NDUFB10O96000 172 aa16.39■□□□□ 0.21
LIMK2-203ENST00000340552 OR52Z1P0C646 297 aa16.39■□□□□ 0.21
LIMK2-203ENST00000340552 BPIFB4P59827 614 aa16.39■□□□□ 0.21
LIMK2-203ENST00000340552 MKRN3Q13064 507 aaKnown RBP16.39■□□□□ 0.21
LIMK2-203ENST00000340552 GIT2Q14161 759 aa16.39■□□□□ 0.21
LIMK2-203ENST00000340552 QRICH1Q2TAL8 776 aa16.39■□□□□ 0.21
LIMK2-203ENST00000340552 FKBP1CQ5VVH2 108 aa16.39■□□□□ 0.21
LIMK2-203ENST00000340552 HOMEZQ8IX15 550 aa16.39■□□□□ 0.21
LIMK2-203ENST00000340552 MIPOL1Q8TD10 442 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms