RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SLC11A1P49279 550 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 ASIC1P78348 528 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 KYAT1Q16773 422 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 AAK1Q2M2I8 961 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 MAP4K3Q8IVH8 894 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 HLA-CQ95604 372 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 IGSF21Q96ID5 467 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 ACAP3Q96P50 834 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 TCF25Q9BQ70 676 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 PTPRHQ9HD43 1115 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 NGRNQ9NPE2 291 aaKnown RBP21■□□□□ 0.95
SYNE4-202ENST00000340477 OLFML3Q9NRN5 406 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 USP25Q9UHP3 1055 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 EXOC7Q9UPT5 735 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 GOLGA6L4A6NEF3 574 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 DDHD2O94830 711 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 GCNT3O95395 438 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 THP07101 528 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 DNAJB1P25685 340 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 AFF1P51825 1210 aaKnown RBP20.99■□□□□ 0.95
SYNE4-202ENST00000340477 OSTNP61366 133 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 GTF2BQ00403 316 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 PLPP4Q5VZY2 271 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 TMC7Q7Z402 723 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 TMEM87AQ8NBN3 555 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 STAMQ92783 540 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 COLEC11Q9BWP8 271 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 TRIM9Q9C026 710 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 CIZ1Q9ULV3 898 aaPredicted RBP20.99■□□□□ 0.95
SYNE4-202ENST00000340477 PRG3Q9Y2Y8 225 aaPredicted RBP20.99■□□□□ 0.95
SYNE4-202ENST00000340477 PCDHB13Q9Y5F0 798 aa20.99■□□□□ 0.95
SYNE4-202ENST00000340477 PIGRP01833 764 aa20.98■□□□□ 0.95
SYNE4-202ENST00000340477 PFKFB1P16118 471 aa20.98■□□□□ 0.95
SYNE4-202ENST00000340477 MCL1Q07820 350 aa20.98■□□□□ 0.95
SYNE4-202ENST00000340477 DSC1Q08554 894 aa20.98■□□□□ 0.95
SYNE4-202ENST00000340477 TUSC3Q13454 348 aa20.98■□□□□ 0.95
SYNE4-202ENST00000340477 SMC1AQ14683 1233 aaKnown RBP20.98■□□□□ 0.95
SYNE4-202ENST00000340477 EP400NLQ6ZTU2 488 aa20.98■□□□□ 0.95
SYNE4-202ENST00000340477 ZNF720Q7Z2F6 126 aa20.98■□□□□ 0.95
SYNE4-202ENST00000340477 COLGALT2Q8IYK4 626 aa20.98■□□□□ 0.95
SYNE4-202ENST00000340477 CCDC34Q96HJ3 373 aa20.98■□□□□ 0.95
SYNE4-202ENST00000340477 CHAMP1Q96JM3 812 aa20.98■□□□□ 0.95
SYNE4-202ENST00000340477 TBC1D7Q9P0N9 293 aa20.98■□□□□ 0.95
SYNE4-202ENST00000340477 EYSQ5T1H1 3165 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 A0A1B0GVL5 298 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 FRMD3A2A2Y4 597 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 NRP1O14786 923 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 COASYQ13057 564 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 CAMK1Q14012 370 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 TPRNQ4KMQ1 711 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 ZC2HC1CQ53FD0 456 aaPredicted RBP20.97■□□□□ 0.95
SYNE4-202ENST00000340477 SLFN12LQ6IEE8 588 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 DDX53Q86TM3 631 aaKnown RBP20.97■□□□□ 0.95
SYNE4-202ENST00000340477 ATXN2LQ8WWM7 1075 aaKnown RBP20.97■□□□□ 0.95
SYNE4-202ENST00000340477 ZBTB45Q96K62 511 aaPredicted RBP20.97■□□□□ 0.95
SYNE4-202ENST00000340477 ACCSQ96QU6 501 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 FIZ1Q96SL8 496 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 MSTO1Q9BUK6 570 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 SLC38A7Q9NVC3 462 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 MIOSQ9NXC5 875 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 MYO7AQ13402 2215 aa20.97■□□□□ 0.95
SYNE4-202ENST00000340477 A0A1W2PQ27 194 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 A0A1W2PQ64 194 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 A0A1W2PQD8 194 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 FSCN2O14926 492 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 B4GALT3O60512 393 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 SLFN14P0C7P3 912 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 SRGAP2BP0DMP2 458 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 IRS1P35568 1242 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 SYKP43405 635 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 ERVFC1P60507 584 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 MRPS5P82675 430 aaKnown RBP20.96■□□□□ 0.95
SYNE4-202ENST00000340477 SYCP3Q8IZU3 236 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 VPS52Q8N1B4 723 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 CEP120Q8N960 986 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 FSIP1Q8NA03 581 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 GSTCDQ8NEC7 633 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 CDCA3Q99618 268 aaPredicted RBP20.96■□□□□ 0.95
SYNE4-202ENST00000340477 C7orf25Q9BPX7 421 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 IGFLR1Q9H665 355 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 TLE6Q9H808 572 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 UBE2ZQ9H832 354 aaPredicted RBP20.96■□□□□ 0.95
SYNE4-202ENST00000340477 PRDM6Q9NQX0 595 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 CLDND1Q9NY35 253 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 TRIP11Q15643 1979 aa20.96■□□□□ 0.95
SYNE4-202ENST00000340477 ABLIM1O14639 778 aa20.95■□□□□ 0.94
SYNE4-202ENST00000340477 CLTAP09496 248 aa20.95■□□□□ 0.94
SYNE4-202ENST00000340477 AFMP43652 599 aa20.95■□□□□ 0.94
SYNE4-202ENST00000340477 NRIP1P48552 1158 aa20.95■□□□□ 0.94
SYNE4-202ENST00000340477 L1TD1Q5T7N2 865 aaKnown RBP20.95■□□□□ 0.94
SYNE4-202ENST00000340477 CNNM4Q6P4Q7 775 aa20.95■□□□□ 0.94
SYNE4-202ENST00000340477 TMEM173Q86WV6 379 aaPredicted RBP20.95■□□□□ 0.94
SYNE4-202ENST00000340477 PABPC5Q96DU9 382 aaKnown RBP20.95■□□□□ 0.94
SYNE4-202ENST00000340477 SNX27Q96L92 541 aa20.95■□□□□ 0.94
SYNE4-202ENST00000340477 GDPD2Q9HCC8 539 aa20.95■□□□□ 0.94
SYNE4-202ENST00000340477 SERTAD1Q9UHV2 236 aa20.95■□□□□ 0.94
SYNE4-202ENST00000340477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.94■□□□□ 0.94
SYNE4-202ENST00000340477 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.94■□□□□ 0.94
SYNE4-202ENST00000340477 PTGESO14684 152 aa20.94■□□□□ 0.94
SYNE4-202ENST00000340477 OGTO15294 1046 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms