RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SLC20A1Q8WUM9 679 aa24.24■■□□□ 1.47
PDLIM2-203ENST00000339162 CAPZA3Q96KX2 299 aa24.24■■□□□ 1.47
PDLIM2-203ENST00000339162 ACO2Q99798 780 aaKnown RBP24.24■■□□□ 1.47
PDLIM2-203ENST00000339162 MYH10P35580 1976 aa24.24■■□□□ 1.47
PDLIM2-203ENST00000339162 ZNF185O15231 689 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 GTF2H1P32780 548 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 IRX5P78411 483 aaPredicted RBP24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 ZNF484Q5JVG2 852 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 ZPBP2Q6X784 338 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 SRGAP1Q7Z6B7 1085 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 HELQQ8TDG4 1101 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 ALS2CR12Q96Q35 445 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 SYT11Q9BT88 431 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 SLC5A4Q9NY91 659 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 NCK2O43639 380 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 TOM1L1O75674 476 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 CYP2B6P20813 491 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 CYP2C19P33261 490 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 TNFAIP2Q03169 654 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 PRPF4BQ13523 1007 aaKnown RBP24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 KIF22Q14807 665 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 SLC30A5Q8TAD4 765 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 PSMB7Q99436 277 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 PDCL3Q9H2J4 239 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 NENFQ9UMX5 172 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 JRKLQ9Y4A0 524 aa24.23■■□□□ 1.47
PDLIM2-203ENST00000339162 KIAA0391O15091 583 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 DYNC1LI2O43237 492 aaPredicted RBP24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 LDHAP00338 332 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 IQCF3P0C7M6 154 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 BIRC3Q13489 604 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 TDRD10Q5VZ19 366 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 IQSEC1Q6DN90 963 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 C17orf99Q6UX52 265 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 C15orf39Q6ZRI6 1047 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 DHX38Q92620 1227 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 NT5C1BQ96P26 610 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 ZIC5Q96T25 663 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 DAAM1Q9Y4D1 1078 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 VTNP04004 478 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 SLC10A3P09131 477 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 CCDC172P0C7W6 258 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 CLDN10P78369 228 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 TFDP1Q14186 410 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 SCARA3Q6AZY7 606 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 RNF10Q8N5U6 811 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 AKT3Q9Y243 479 aa24.22■■□□□ 1.47
PDLIM2-203ENST00000339162 ANO9A1A5B4 782 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 CYP26A1O43174 497 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 PALMO75781 387 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 SGPL1O95470 568 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 MFAP3P55082 362 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 TUBB2AQ13885 445 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 TMEM132AQ24JP5 1023 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 C10orf76Q5T2E6 689 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 CEP112Q8N8E3 955 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 FAM212AQ96EL1 285 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 TUBB2BQ9BVA1 445 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 C2orf40Q9H1Z8 148 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 TAS2R14Q9NYV8 317 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 CNTNAP2Q9UHC6 1331 aa24.21■■□□□ 1.47
PDLIM2-203ENST00000339162 FAM189A1O60320 539 aa24.2■■□□□ 1.47
PDLIM2-203ENST00000339162 C4BPAP04003 597 aaKnown RBP24.2■■□□□ 1.47
PDLIM2-203ENST00000339162 TNFAIP3P21580 790 aa24.2■■□□□ 1.47
PDLIM2-203ENST00000339162 PTENP60484 403 aa24.2■■□□□ 1.47
PDLIM2-203ENST00000339162 OSTNP61366 133 aa24.2■■□□□ 1.47
PDLIM2-203ENST00000339162 WHAMMP3Q1A5X7 153 aa24.2■■□□□ 1.47
PDLIM2-203ENST00000339162 ZACNQ401N2 412 aa24.2■■□□□ 1.47
PDLIM2-203ENST00000339162 RSRC2Q7L4I2 434 aaKnown RBP24.2■■□□□ 1.47
PDLIM2-203ENST00000339162 OR5B17Q8NGF7 314 aa24.2■■□□□ 1.47
PDLIM2-203ENST00000339162 ARID3AQ99856 593 aa24.2■■□□□ 1.47
PDLIM2-203ENST00000339162 IFT122Q9HBG6 1241 aa24.2■■□□□ 1.47
PDLIM2-203ENST00000339162 A0A087WZ62 844 aa24.2■■□□□ 1.46
PDLIM2-203ENST00000339162 ANXA13P27216 316 aa24.2■■□□□ 1.46
PDLIM2-203ENST00000339162 CXCR5P32302 372 aa24.2■■□□□ 1.46
PDLIM2-203ENST00000339162 MBTD1Q05BQ5 628 aa24.2■■□□□ 1.46
PDLIM2-203ENST00000339162 DGKDQ16760 1214 aa24.2■■□□□ 1.46
PDLIM2-203ENST00000339162 TAF3Q5VWG9 929 aa24.2■■□□□ 1.46
PDLIM2-203ENST00000339162 SPOPLQ6IQ16 392 aa24.2■■□□□ 1.46
PDLIM2-203ENST00000339162 SLC47A2Q86VL8 602 aa24.2■■□□□ 1.46
PDLIM2-203ENST00000339162 AGPAT1Q99943 283 aa24.2■■□□□ 1.46
PDLIM2-203ENST00000339162 FDXACB1Q9BRP7 624 aaPredicted RBP24.2■■□□□ 1.46
PDLIM2-203ENST00000339162 FZD8Q9H461 694 aa24.2■■□□□ 1.46
PDLIM2-203ENST00000339162 ABLIM1O14639 778 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 VNN1O95497 513 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 FTCDO95954 541 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 HLA-DRAP01903 254 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 H2AFZP0C0S5 128 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 NFRKBQ6P4R8 1299 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 H2AFVQ71UI9 128 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 THNSL1Q8IYQ7 743 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 FAM71AQ8IYT1 594 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 GOLPH3Q9H4A6 298 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 PASKQ96RG2 1323 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 FAM155AB1AL88 458 aaPredicted RBP24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 ACKR2O00590 384 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 ABCB4P21439 1286 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 PIK3CAP42336 1068 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 NOP2P46087 812 aaKnown RBP24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 DNA2P51530 1060 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms