RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 RBM10P98175 930 aaKnown RBP16.77■□□□□ 0.28
PRKN-201ENST00000338468 TMEM132AQ24JP5 1023 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 DCAF4L1Q3SXM0 396 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 DDX53Q86TM3 631 aaKnown RBP16.77■□□□□ 0.28
PRKN-201ENST00000338468 EFHBQ8N7U6 833 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 VN1R2Q8NFZ6 395 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 TMEM169Q96HH4 297 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 FIZ1Q96SL8 496 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 POP1Q99575 1024 aaKnown RBP16.77■□□□□ 0.28
PRKN-201ENST00000338468 MRPL4Q9BYD3 311 aaKnown RBP16.77■□□□□ 0.28
PRKN-201ENST00000338468 ZBP1Q9H171 429 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 CDT1Q9H211 546 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 ENTPD7Q9NQZ7 604 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 STK17AQ9UEE5 414 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 C19orf67A6NJJ6 358 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 ALDH2P05091 517 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 KCNC3Q14003 757 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 NAB2Q15742 525 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 DUSP6Q16828 381 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 AXDND1Q5T1B0 1012 aaPredicted RBP16.76■□□□□ 0.27
PRKN-201ENST00000338468 RRAGBQ5VZM2 374 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 VPS52Q8N1B4 723 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 CEP120Q8N960 986 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 MRPL43Q8N983 215 aaKnown RBP16.76■□□□□ 0.27
PRKN-201ENST00000338468 ZBTB45Q96K62 511 aaPredicted RBP16.76■□□□□ 0.27
PRKN-201ENST00000338468 FAM193BQ96PV7 902 aaPredicted RBP16.76■□□□□ 0.27
PRKN-201ENST00000338468 ADPGKQ9BRR6 497 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 PANK2Q9BZ23 570 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 TLE6Q9H808 572 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 NGRNQ9NPE2 291 aaKnown RBP16.76■□□□□ 0.27
PRKN-201ENST00000338468 CLEC1BQ9P126 229 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 CCDC39Q9UFE4 941 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 FAN1Q9Y2M0 1017 aa16.76■□□□□ 0.27
PRKN-201ENST00000338468 CARNS1A5YM72 827 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 C2orf71A6NGG8 1288 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 MYMKA6NI61 221 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 BRD1O95696 1058 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 SMTNP53814 917 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 DNM1Q05193 864 aaKnown RBP16.75■□□□□ 0.27
PRKN-201ENST00000338468 GRIK3Q13003 919 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 SHC4Q6S5L8 630 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 HFE2Q6ZVN8 426 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 TMC7Q7Z402 723 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 HAUS6Q7Z4H7 955 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 AUTS2Q8WXX7 1259 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 PPP2R3CQ969Q6 453 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 MSLNLQ96KJ4 702 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 MFSD14AQ96MC6 490 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 HAPLN2Q9GZV7 340 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 PARVGQ9HBI0 331 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 LARSQ9P2J5 1176 aaKnown RBP16.75■□□□□ 0.27
PRKN-201ENST00000338468 CACNG4Q9UBN1 327 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 KCNG1Q9UIX4 513 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 GDAQ9Y2T3 454 aa16.75■□□□□ 0.27
PRKN-201ENST00000338468 PRG3Q9Y2Y8 225 aaPredicted RBP16.75■□□□□ 0.27
PRKN-201ENST00000338468 MEFVO15553 781 aaPredicted RBP16.74■□□□□ 0.27
PRKN-201ENST00000338468 FAM13AO94988 1023 aa16.74■□□□□ 0.27
PRKN-201ENST00000338468 CTSAP10619 480 aa16.74■□□□□ 0.27
PRKN-201ENST00000338468 TXLNAP40222 546 aa16.74■□□□□ 0.27
PRKN-201ENST00000338468 GRM5P41594 1212 aa16.74■□□□□ 0.27
PRKN-201ENST00000338468 OR1G1P47890 313 aa16.74■□□□□ 0.27
PRKN-201ENST00000338468 SMC1AQ14683 1233 aaKnown RBP16.74■□□□□ 0.27
PRKN-201ENST00000338468 ZNF568Q3ZCX4 644 aa16.74■□□□□ 0.27
PRKN-201ENST00000338468 MPZL3Q6UWV2 235 aa16.74■□□□□ 0.27
PRKN-201ENST00000338468 ZBTB33Q86T24 672 aa16.74■□□□□ 0.27
PRKN-201ENST00000338468 RNF168Q8IYW5 571 aaPredicted RBP16.74■□□□□ 0.27
PRKN-201ENST00000338468 MYCT1Q8N699 235 aa16.74■□□□□ 0.27
PRKN-201ENST00000338468 RABGGTAQ92696 567 aa16.74■□□□□ 0.27
PRKN-201ENST00000338468 DNAJC19Q96DA6 116 aa16.74■□□□□ 0.27
PRKN-201ENST00000338468 CHAMP1Q96JM3 812 aa16.74■□□□□ 0.27
PRKN-201ENST00000338468 PAAF1Q9BRP4 392 aa16.74■□□□□ 0.27
PRKN-201ENST00000338468 DAXXQ9UER7 740 aaPredicted RBP16.74■□□□□ 0.27
PRKN-201ENST00000338468 ZNF318Q5VUA4 2279 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 LILRB3O75022 631 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 CXCL14O95715 111 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 KRT18P05783 430 aaKnown RBP16.73■□□□□ 0.27
PRKN-201ENST00000338468 MCF2P10911 925 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 STRN3Q13033 797 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 SMAD2Q15796 467 aaKnown RBP16.73■□□□□ 0.27
PRKN-201ENST00000338468 E2F4Q16254 413 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 ATL3Q6DD88 541 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 ALKAL1Q6UXT8 129 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 ZPBP2Q6X784 338 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 CCDC73Q6ZRK6 1079 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 DYMQ7RTS9 669 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 TAS1R1Q7RTX1 841 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 DDX12PQ92771 950 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 RPS6KC1Q96S38 1066 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 CDCA3Q99618 268 aaPredicted RBP16.73■□□□□ 0.27
PRKN-201ENST00000338468 BARX2Q9UMQ3 279 aaPredicted RBP16.73■□□□□ 0.27
PRKN-201ENST00000338468 TBX20Q9UMR3 447 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 IRAK3Q9Y616 596 aa16.73■□□□□ 0.27
PRKN-201ENST00000338468 C5orf42Q9H799 3197 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 TRAK2O60296 914 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 CUTAO60888 179 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 CLASP2O75122 1294 aaKnown RBP16.72■□□□□ 0.27
PRKN-201ENST00000338468 TOM1L1O75674 476 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 NMT1P30419 496 aaKnown RBP16.72■□□□□ 0.27
PRKN-201ENST00000338468 STAT6P42226 847 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 NDUFV1P49821 464 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms