RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 PCIF1Q9H4Z3 704 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 RPF1Q9H9Y2 349 aaKnown RBP12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 SLC28A3Q9HAS3 691 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 PLEKHA5Q9HAU0 1116 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 KLK14Q9P0G3 267 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 INPP5FQ9Y2H2 1132 aa12.99□□□□□ -0.33
SPTLC1-202ENST00000337841 ARL5CA6NH57 179 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 TISP43B9A030 160 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 PSMA7O14818 248 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 CLIC2O15247 247 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 EXTL3O43909 919 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 RECQL4O94761 1208 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 LETM1O95202 739 aaPredicted RBP12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 RPL13P26373 211 aaKnown RBP12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 ADSSP30520 456 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 GATMP50440 423 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 MYBPC2Q14324 1141 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 KLHL40Q2TBA0 621 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 PAN2Q504Q3 1202 aaKnown RBP12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 CLLU1OSQ5K130 101 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 SPOUT1Q5T280 376 aaKnown RBP12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 CD302Q8IX05 232 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 SMYD4Q8IYR2 804 aaPredicted RBP12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 ADSSL1Q8N142 457 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 MLKLQ8NB16 471 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 NOC3LQ8WTT2 800 aaKnown RBP12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 TSG101Q99816 390 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 HAPLN2Q9GZV7 340 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 IKZF4Q9H2S9 585 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 KCTD10Q9H3F6 313 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 AAASQ9NRG9 546 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 AGPAT3Q9NRZ7 376 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 RNF19AQ9NV58 838 aa12.98□□□□□ -0.33
SPTLC1-202ENST00000337841 ZMYM2Q9UBW7 1377 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 CARNS1A5YM72 827 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 ZNF233A6NK53 670 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 MEIS3P2A8K0S8 358 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 TULP1O00294 542 aaPredicted RBP12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 EXOC3O60645 756 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 MYOGP15173 224 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 DNAJB2P25686 324 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 PBX2P40425 430 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 MLH1P40692 756 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 ACOT2P49753 483 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 CYP2J2P51589 502 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 SEZ6Q53EL9 994 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 HABP4Q5JVS0 413 aaKnown RBP12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 SASS6Q6UVJ0 657 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 C12orf56Q8IXR9 622 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 LRRC43Q8N309 656 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 GPD1LQ8N335 351 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 CEP120Q8N960 986 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 XXYLT1Q8NBI6 393 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 TIFAQ96CG3 184 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 FAM212AQ96EL1 285 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 SAMD11Q96NU1 681 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 TSPAN18Q96SJ8 248 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 CBWD1Q9BRT8 395 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 FAM213AQ9BRX8 229 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 NKX2-4Q9H2Z4 354 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 HSPBP1Q9NZL4 362 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 DACH1Q9UI36 760 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 CPSF3Q9UKF6 684 aaKnown RBP12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 TRAF3IP3Q9Y228 551 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 YBX2Q9Y2T7 364 aaKnown RBP12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 RWDD3Q9Y3V2 267 aa12.97□□□□□ -0.33
SPTLC1-202ENST00000337841 BICDL2A1A5D9 508 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 GOLGA8IPA6NC78 632 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 GOLGA8JA6NMD2 632 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 PPP1R3GB7ZBB8 358 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 INPPL1O15357 1258 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 POMCP01189 267 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 ALDH2P05091 517 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 THP07101 528 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 CA3P07451 260 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 CCNE1P24864 410 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 NLRP12P59046 1061 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 ADAM9Q13443 819 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 SURF1Q15526 300 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 NFKBIBQ15653 356 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 SLC10A6Q3KNW5 377 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 CENPPQ6IPU0 288 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 CAVIN1Q6NZI2 390 aaKnown RBP12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 ALKAL1Q6UXT8 129 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 SLC9A9Q8IVB4 645 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 TMEM192Q8IY95 271 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 TMEM174Q8WUU8 243 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 P2RX5Q93086 422 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 SAAL1Q96ER3 474 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 ZFP42Q96MM3 310 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 TGS1Q96RS0 853 aaKnown RBP12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 SEMA6BQ9H3T3 888 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 ASB7Q9H672 318 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 RC3H2Q9HBD1 1191 aaKnown RBP12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 SLC38A7Q9NVC3 462 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 TBC1D13Q9NVG8 400 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 DMAC2Q9NW81 257 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 MIOSQ9NXC5 875 aa12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 PCDHB12Q9Y5F1 795 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms