RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 RTFDC1Q9BY42 306 aaPredicted RBP14.68□□□□□ -0.06
SYNE3-201ENST00000334258 APEX2Q9UBZ4 518 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 LRRD1A4D1F6 860 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 ZBTB5O15062 677 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 TTLL1O95922 423 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 KRT17Q04695 432 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 TRAF1Q13077 416 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 RNF207Q6ZRF8 634 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 TSC22D3Q99576 134 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 HAO1Q9UJM8 370 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
SYNE3-201ENST00000334258 RABGAP1Q9Y3P9 1069 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 EXOC3O60645 756 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 NEFHP12036 1026 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 CTNNA2P26232 953 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 TBC1D25Q3MII6 688 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 SGO2Q562F6 1265 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 PPP1R18Q6NYC8 613 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 ASRGL1Q7L266 308 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 EPM2AIP1Q7L775 607 aaPredicted RBP14.68□□□□□ -0.06
SYNE3-201ENST00000334258 SYCP3Q8IZU3 236 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 DDX4Q9NQI0 724 aaKnown RBP14.68□□□□□ -0.06
SYNE3-201ENST00000334258 RGL1Q9NZL6 768 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 ZMYND8Q9ULU4 1186 aaPredicted RBP14.68□□□□□ -0.06
SYNE3-201ENST00000334258 SNED1Q8TER0 1413 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 ATP8B3O60423 1300 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 CLDN3O15551 220 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 TGFB1I1O43294 461 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 BCRP11274 1271 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 ATP4AP20648 1035 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 CHKAP35790 457 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 ZNF76P36508 570 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 SESN3P58005 492 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 STRN3Q13033 797 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 MIGA2Q7L4E1 593 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 CYFIP1Q7L576 1253 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 CPNE8Q86YQ8 564 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 RPUSD2Q8IZ73 545 aaKnown RBP14.67□□□□□ -0.06
SYNE3-201ENST00000334258 LRRC37BQ96QE4 947 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 MOV10L1Q9BXT6 1211 aaKnown RBP14.67□□□□□ -0.06
SYNE3-201ENST00000334258 DAGLAQ9Y4D2 1042 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 SCN7AQ01118 1682 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 H0YIN7 160 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 LINGO3P0C6S8 592 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 RPA1P27694 616 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 ADCY8P40145 1251 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 CLK2P49760 499 aaKnown RBP14.67□□□□□ -0.06
SYNE3-201ENST00000334258 IL9RQ01113 521 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 ICA1Q05084 483 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 NSMFQ6X4W1 530 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 KLHL23Q8NBE8 558 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 MYLK2Q9H1R3 596 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 RNPEPL1Q9HAU8 725 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 DPPA5A6NC42 116 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 PLSCR1O15162 318 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 GGPS1O95749 300 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 MKRN3Q13064 507 aaKnown RBP14.67□□□□□ -0.06
SYNE3-201ENST00000334258 DNAJC3Q13217 504 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 TNFAIP8L3Q5GJ75 292 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 SLC30A9Q6PML9 568 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 PWWP2AQ96N64 755 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 CCDC77Q9BR77 488 aa14.67□□□□□ -0.06
SYNE3-201ENST00000334258 RASA4BC9J798 803 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 RASA4O43374 803 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 TTC4O95801 387 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 SPATA31C1P0DKV0 1188 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 CALB2P22676 271 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 ARHGAP4P98171 946 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 MGAT5Q09328 741 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 USP4Q13107 963 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 SLC15A2Q16348 729 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 TPH2Q8IWU9 490 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 CYP4X1Q8N118 509 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 DNAJC18Q9H819 358 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 PCDHA3Q9Y5H8 950 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 CHMP2AO43633 222 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 SPAG7O75391 227 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 ALDH3A1P30838 453 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 TMED2Q15363 201 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 PHLDB3Q6NSJ2 640 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 CYP4F22Q6NT55 531 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 C11orf63Q6NUN7 778 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 ATG4AQ8WYN0 398 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 MRRFQ96E11 262 aaKnown RBP14.66□□□□□ -0.06
SYNE3-201ENST00000334258 MAGEB18Q96M61 343 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 WNT8AQ9H1J5 351 aa14.66□□□□□ -0.06
SYNE3-201ENST00000334258 LIN7AO14910 233 aaPredicted RBP14.65□□□□□ -0.06
SYNE3-201ENST00000334258 RAD17O75943 681 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 NPR1P16066 1061 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 IKQ13123 557 aaPredicted RBP14.65□□□□□ -0.06
SYNE3-201ENST00000334258 MTFR1Q15390 333 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 CCDC6Q16204 474 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 TSNAXIP1Q2TAA8 658 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 MUM1Q2TAK8 710 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 PPP1R21Q6ZMI0 780 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 SP8Q8IXZ3 490 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 TEX9Q8N6V9 391 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 C9orf72Q96LT7 481 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 CRAMP1Q96RY5 1269 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 LBHD1Q9BQE6 289 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms