RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 LSM14BQ9BX40 385 aaKnown RBP25.26■■□□□ 1.63
TSEN54-201ENST00000333213 KRT9P35527 623 aa25.25■■□□□ 1.63
TSEN54-201ENST00000333213 TMEM117Q9H0C3 514 aa25.25■■□□□ 1.63
TSEN54-201ENST00000333213 TRMT13Q9NUP7 481 aaKnown RBP25.25■■□□□ 1.63
TSEN54-201ENST00000333213 RBAKQ9NYW8 714 aaPredicted RBP25.25■■□□□ 1.63
TSEN54-201ENST00000333213 A0A1B0GUA9 196 aa25.25■■□□□ 1.63
TSEN54-201ENST00000333213 OGTO15294 1046 aa25.25■■□□□ 1.63
TSEN54-201ENST00000333213 HSPA8P11142 646 aaKnown RBP25.25■■□□□ 1.63
TSEN54-201ENST00000333213 PSMD6Q15008 389 aa25.25■■□□□ 1.63
TSEN54-201ENST00000333213 PTGISQ16647 500 aa25.25■■□□□ 1.63
TSEN54-201ENST00000333213 ZNF516Q92618 1163 aa25.25■■□□□ 1.63
TSEN54-201ENST00000333213 DEFB118Q96PH6 123 aa25.25■■□□□ 1.63
TSEN54-201ENST00000333213 PDE11AQ9HCR9 933 aa25.25■■□□□ 1.63
TSEN54-201ENST00000333213 SIX2Q9NPC8 291 aa25.25■■□□□ 1.63
TSEN54-201ENST00000333213 ABHD10Q9NUJ1 306 aa25.25■■□□□ 1.63
TSEN54-201ENST00000333213 GCNT4Q9P109 453 aa25.25■■□□□ 1.63
TSEN54-201ENST00000333213 CPSF3Q9UKF6 684 aaKnown RBP25.25■■□□□ 1.63
TSEN54-201ENST00000333213 PTPRJQ12913 1337 aa25.25■■□□□ 1.63
TSEN54-201ENST00000333213 RIOK3O14730 519 aaKnown RBP25.24■■□□□ 1.63
TSEN54-201ENST00000333213 ERLIN2O94905 339 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 DLATP10515 647 aaKnown RBP25.24■■□□□ 1.63
TSEN54-201ENST00000333213 SKILP12757 684 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 CLDN10P78369 228 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 TMEM132AQ24JP5 1023 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 GBP6Q6ZN66 633 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 CNGA4Q8IV77 575 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 TMEM192Q8IY95 271 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 ARRDC4Q8NCT1 418 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 LMO3Q8TAP4 145 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 ZMYND15Q9H091 742 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 GANQ9H2C0 597 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 A0A1W2PQJ5 194 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 TULP1O00294 542 aaPredicted RBP25.24■■□□□ 1.63
TSEN54-201ENST00000333213 CCL5P13501 91 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 CRYBB1P53674 252 aaPredicted RBP25.24■■□□□ 1.63
TSEN54-201ENST00000333213 MYL7Q01449 175 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 THNSL1Q8IYQ7 743 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 ANKRD7Q92527 254 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 CELF4Q9BZC1 486 aaKnown RBP25.24■■□□□ 1.63
TSEN54-201ENST00000333213 LUC7L2Q9Y383 392 aaKnown RBP25.24■■□□□ 1.63
TSEN54-201ENST00000333213 PAXBP1Q9Y5B6 917 aa25.24■■□□□ 1.63
TSEN54-201ENST00000333213 ENPEPQ07075 957 aa25.23■■□□□ 1.63
TSEN54-201ENST00000333213 TRIM65Q6PJ69 517 aa25.23■■□□□ 1.63
TSEN54-201ENST00000333213 NEK11Q8NG66 645 aa25.23■■□□□ 1.63
TSEN54-201ENST00000333213 BAP1Q92560 729 aa25.23■■□□□ 1.63
TSEN54-201ENST00000333213 DHX38Q92620 1227 aaKnown RBP25.23■■□□□ 1.63
TSEN54-201ENST00000333213 PANX2Q96RD6 677 aa25.23■■□□□ 1.63
TSEN54-201ENST00000333213 RNF208Q9H0X6 261 aa25.23■■□□□ 1.63
TSEN54-201ENST00000333213 PHF24Q9UPV7 400 aa25.23■■□□□ 1.63
TSEN54-201ENST00000333213 CDY2AQ9Y6F7 541 aa25.23■■□□□ 1.63
TSEN54-201ENST00000333213 MEFVO15553 781 aaPredicted RBP25.22■■□□□ 1.63
TSEN54-201ENST00000333213 CHRNA1P02708 482 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 OSTNP61366 133 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 MRPS6P82932 125 aaKnown RBP25.22■■□□□ 1.63
TSEN54-201ENST00000333213 LMBRD2Q68DH5 695 aaPredicted RBP25.22■■□□□ 1.63
TSEN54-201ENST00000333213 CATSPER4Q7RTX7 472 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 RPAINQ86UA6 219 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 BRSK2Q8IWQ3 736 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 SLC43A3Q8NBI5 491 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 DNAJC7Q99615 494 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 PLCB1Q9NQ66 1216 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 TPM1P09493 284 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 KLHDC7AQ5VTJ3 777 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 SV2AQ7L0J3 742 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 OSBPL7Q9BZF2 842 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 STARD7Q9NQZ5 370 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 KCND1Q9NSA2 647 aa25.22■■□□□ 1.63
TSEN54-201ENST00000333213 AJAP1Q9UKB5 411 aaPredicted RBP25.22■■□□□ 1.63
TSEN54-201ENST00000333213 PMM2O15305 246 aa25.21■■□□□ 1.63
TSEN54-201ENST00000333213 CTSHP09668 335 aa25.21■■□□□ 1.63
TSEN54-201ENST00000333213 MXI1P50539 228 aa25.21■■□□□ 1.63
TSEN54-201ENST00000333213 POLR2FP61218 127 aaKnown RBP25.21■■□□□ 1.63
TSEN54-201ENST00000333213 ZBED6P86452 979 aa25.21■■□□□ 1.63
TSEN54-201ENST00000333213 MGAT3Q09327 533 aa25.21■■□□□ 1.63
TSEN54-201ENST00000333213 ENOX2Q16206 610 aaKnown RBP25.21■■□□□ 1.63
TSEN54-201ENST00000333213 EPC2Q52LR7 807 aa25.21■■□□□ 1.63
TSEN54-201ENST00000333213 E4F1Q66K89 784 aaPredicted RBP25.21■■□□□ 1.63
TSEN54-201ENST00000333213 C15orf39Q6ZRI6 1047 aa25.21■■□□□ 1.63
TSEN54-201ENST00000333213 BAG1Q99933 345 aaPredicted RBP25.21■■□□□ 1.63
TSEN54-201ENST00000333213 TMEM8AQ9HCN3 771 aa25.21■■□□□ 1.63
TSEN54-201ENST00000333213 NLRC4Q9NPP4 1024 aa25.21■■□□□ 1.63
TSEN54-201ENST00000333213 MCF2P10911 925 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 FECHP22830 423 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 PTPN11Q06124 597 aaPredicted RBP25.2■■□□□ 1.62
TSEN54-201ENST00000333213 GJB7Q6PEY0 223 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 WDR59Q6PJI9 974 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 OR8K1Q8NGG5 319 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 OGDHLQ9ULD0 1010 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 NOC2LQ9Y3T9 749 aaKnown RBP25.2■■□□□ 1.62
TSEN54-201ENST00000333213 DNM1LO00429 736 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 P4HA2O15460 535 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 UCHL3P15374 230 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 PCBP1Q15365 356 aaKnown RBP eCLIP25.2■■□□□ 1.62
TSEN54-201ENST00000333213 TRIM71Q2Q1W2 868 aaKnown RBP25.2■■□□□ 1.62
TSEN54-201ENST00000333213 KRT39Q6A163 491 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 SEMA4DQ92854 862 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 IQCDQ96DY2 449 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 CCDC51Q96ER9 411 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 FNBP1Q96RU3 617 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 SENP6Q9GZR1 1112 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms