RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 USP20Q9Y2K6 914 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 AFF2P51816 1311 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 PRUNE1Q86TP1 453 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 MXRA8Q9BRK3 442 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 CDC42EP4Q9H3Q1 356 aaKnown RBP18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 TMX2Q9Y320 296 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 O00370 1275 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 HIBCHQ6NVY1 386 aaPredicted RBP18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 ANKRD42Q8N9B4 389 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 TAS1R2Q8TE23 839 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 RANBP17Q9H2T7 1088 aaKnown RBP18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 VEZTQ9HBM0 779 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 CCT8L1PA6NM43 557 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 TP73O15350 636 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 CYP11B1P15538 503 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 ADSSP30520 456 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 KRT17Q04695 432 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 PLCB4Q15147 1175 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 PPP2R5EQ16537 467 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 LMBRD2Q68DH5 695 aaPredicted RBP18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 EXOC3L1Q86VI1 746 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 ACCSQ96QU6 501 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 AAASQ9NRG9 546 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 ASIC3Q9UHC3 531 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 TBK1Q9UHD2 729 aa18.62■□□□□ 0.57
PTP4A3-201ENST00000329397 TTC36A6NLP5 189 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 YDJCA8MPS7 323 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 CHUKO15111 745 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 KRT5P13647 590 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 PDE6BP35913 854 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 DRP2Q13474 957 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 ZKSCAN8Q15776 578 aaPredicted RBP18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 FAM102BQ5T8I3 360 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 CC2D2BQ6DHV5 1058 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 CCDC91Q7Z6B0 441 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 FAM71AQ8IYT1 594 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 C3orf20Q8ND61 904 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.61■□□□□ 0.572e-6■■□□□ 13.1
PTP4A3-201ENST00000329397 MRPL11Q9Y3B7 192 aaKnown RBP18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 GH1P01241 217 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 RDXP35241 583 aaKnown RBP18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 MAP2K2P36507 400 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 DRG2P55039 364 aaKnown RBP18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 SNCBQ16143 134 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 GDAP1Q8TB36 358 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 TCP11Q8WWU5 503 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 TBC1D31Q96DN5 1066 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 HEMGNQ9BXL5 484 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 TMEM39BQ9GZU3 492 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 CCPG1Q9ULG6 757 aa18.61■□□□□ 0.57
PTP4A3-201ENST00000329397 PODXLO00592 558 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 DHX15O43143 795 aaKnown RBP18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 SORBS3O60504 671 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 PLS3P13797 630 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 EIF2AK2P19525 551 aaKnown RBP18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 HADHBP55084 474 aaKnown RBP18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 SNRNP35Q16560 246 aaKnown RBP18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 SGO2Q562F6 1265 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 SLC27A3Q5K4L6 730 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 DYDC1Q8WWB3 177 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 ART4Q93070 314 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 FGFR1OP2Q9NVK5 253 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 ANAPC7Q9UJX3 599 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 ATRNL1Q5VV63 1379 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 SPATA31A6Q5VVP1 1343 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 ECEL1O95672 775 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 ALAS1P13196 640 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 YWHABP31946 246 aaKnown RBP18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 GJC1P36383 396 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 ADCY2Q08462 1091 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 C6orf118Q5T5N4 469 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 TBC1D1Q86TI0 1168 aaPredicted RBP18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 RPS6KC1Q96S38 1066 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 WNT8AQ9H1J5 351 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 TMEM206Q9H813 350 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 KCND2Q9NZV8 630 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 MTUS1Q9ULD2 1270 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 AGAP1Q9UPQ3 857 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 PASKQ96RG2 1323 aa18.6■□□□□ 0.57
PTP4A3-201ENST00000329397 CALCOCO2Q13137 446 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 CNGA2Q16280 664 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 KYNUQ16719 465 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 BAIAP2L1Q9UHR4 511 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 R3HDM2Q9Y2K5 976 aaKnown RBP18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 ATP9AO75110 1047 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 AGTP01019 485 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 P4HBP07237 508 aaKnown RBP18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 MYCLP12524 364 aaPredicted RBP18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 RARGP13631 454 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 RFX1P22670 979 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 RWDD2BP57060 319 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 ARMC9Q7Z3E5 817 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 PNMA8AQ86V59 439 aaPredicted RBP18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 NLGN1Q8N2Q7 840 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 CPA5Q8WXQ8 436 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 CENPTQ96BT3 561 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 KCNK9Q9NPC2 374 aa18.59■□□□□ 0.57
PTP4A3-201ENST00000329397 SAMD15Q9P1V8 674 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms