RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 CDCA3Q99618 268 aaPredicted RBP16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 PTPRHQ9HD43 1115 aa16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 FAM13BQ9NYF5 915 aa16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 MYMKA6NI61 221 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 THP07101 528 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 GRM5P41594 1212 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 KCNQ1P51787 676 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 KRT85P78386 507 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 SHC4Q6S5L8 630 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 EFHBQ8N7U6 833 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 TMEM87AQ8NBN3 555 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 BCL7CQ8WUZ0 217 aaPredicted RBP16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 KCNN1Q92952 543 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 COLEC11Q9BWP8 271 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 LRRC27Q9C0I9 530 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 CUEDC2Q9H467 287 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 TOPORSQ9NS56 1045 aaPredicted RBP16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 TBX20Q9UMR3 447 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 PCDHA7Q9UN72 937 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 ZDHHC9Q9Y397 364 aa16.06■□□□□ 0.16
TUBA3D-201ENST00000321253 XIRP2A4UGR9 3374 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 H3BQ06 376 aaPredicted RBP16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 PER2O15055 1255 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 CLDN3O15551 220 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 GAP43P17677 238 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 PROZP22891 400 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 NDUFV1P49821 464 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 LIG4P49917 911 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 OSTNP61366 133 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 TUSC3Q13454 348 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 NOLC1Q14978 699 aaKnown RBP eCLIP16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 CTC1Q2NKJ3 1217 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 LEXMQ3ZCV2 418 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 AXDND1Q5T1B0 1012 aaPredicted RBP16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 IQUBQ8NA54 791 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 DHX58Q96C10 678 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 ZBP1Q9H171 429 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 SEL1LQ9UBV2 794 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 RCOR1Q9UKL0 485 aa16.05■□□□□ 0.16
TUBA3D-201ENST00000321253 HIDE1A8MVS5 230 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 HNRNPDLO14979 420 aaKnown RBP16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 LINC01565O15544 149 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 CXCL14O95715 111 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 SRGAP2BP0DMP2 458 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 IDEP14735 1019 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 NMT1P30419 496 aaKnown RBP16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 ADAM15Q13444 863 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 DUSP6Q16828 381 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 SFR1Q86XK3 245 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 CEP120Q8N960 986 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 MRPL43Q8N983 215 aaKnown RBP16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 ZBTB45Q96K62 511 aaPredicted RBP16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 SPATA32Q96LK8 384 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 ACAP3Q96P50 834 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 COL25A1Q9BXS0 654 aaPredicted RBP16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 TNMDQ9H2S6 317 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 MRPL44Q9H9J2 332 aaKnown RBP16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 SPTBN5Q9NRC6 3674 aaKnown RBP16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 C2orf71A6NGG8 1288 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 DLL1O00548 723 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 ABLIM1O14639 778 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 PTGESO14684 152 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 CTSAP10619 480 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 BMP1P13497 986 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 GTF2BQ00403 316 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 AMPD3Q01432 767 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 PUS10Q3MIT2 529 aaKnown RBP16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 ADAMTS19Q8TE59 1207 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 DNAJC19Q96DA6 116 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 PYM1Q9BRP8 204 aaKnown RBP16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 MARCH5Q9NX47 278 aa16.04■□□□□ 0.16
TUBA3D-201ENST00000321253 CASTOR2A6NHX0 329 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 POLR2DO15514 142 aaKnown RBP16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 TBX10O75333 385 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 LTBRP36941 435 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 MCL1Q07820 350 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 E2F4Q16254 413 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 HERC4Q5GLZ8 1057 aaPredicted RBP16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 GLRA4Q5JXX5 417 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 RESP18Q5W5W9 173 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 PTCRAQ6ISU1 281 aaPredicted RBP16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 MAP4K3Q8IVH8 894 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 CCDC65Q8IXS2 484 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 LEO1Q8WVC0 666 aaPredicted RBP16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 AUTS2Q8WXX7 1259 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 STAMQ92783 540 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 FIZ1Q96SL8 496 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 VN1R3Q9BXE9 311 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 ST6GALNAC4Q9H4F1 302 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 MAGEF1Q9HAY2 307 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 PANK4Q9NVE7 773 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 FAM50BQ9Y247 325 aa16.03■□□□□ 0.16
TUBA3D-201ENST00000321253 TADA2AO75478 443 aa16.02■□□□□ 0.15
TUBA3D-201ENST00000321253 PIGRP01833 764 aa16.02■□□□□ 0.15
TUBA3D-201ENST00000321253 SOD2P04179 222 aa16.02■□□□□ 0.15
TUBA3D-201ENST00000321253 URODP06132 367 aa16.02■□□□□ 0.15
TUBA3D-201ENST00000321253 DLX2Q07687 328 aaPredicted RBP16.02■□□□□ 0.15
TUBA3D-201ENST00000321253 HSP90AA2PQ14568 343 aaPredicted RBP16.02■□□□□ 0.15
TUBA3D-201ENST00000321253 CLUL1Q15846 466 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms