RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.6□□□□□ -0.87
CTC1-201ENST00000315684 CNTNAP5Q8WYK1 1306 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 UBA6A0AVT1 1052 aaPredicted RBP9.59□□□□□ -0.87
CTC1-201ENST00000315684 I3L4J1 428 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 DNAJC6O75061 913 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 CD4P01730 458 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 SPATA31D3P0C874 917 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 PHBP35232 272 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 NDUFV1P49821 464 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 ZNF131P52739 623 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 GOLGA7BQ2TAP0 167 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 EPC2Q52LR7 807 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 FAM171A1Q5VUB5 890 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 KRT39Q6A163 491 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 SPATA31D4Q6ZUB0 917 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 ZNF512BQ96KM6 892 aaPredicted RBP9.59□□□□□ -0.87
CTC1-201ENST00000315684 KIAA1683Q9H0B3 1180 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 ITIH6Q6UXX5 1313 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 MAP3K7O43318 606 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 ZMYND10O75800 440 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 SYF2O95926 243 aaKnown RBP9.59□□□□□ -0.87
CTC1-201ENST00000315684 PGM5Q15124 567 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 PCSK7Q16549 785 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 MTERF4Q7Z6M4 381 aaKnown RBP9.59□□□□□ -0.87
CTC1-201ENST00000315684 TRIM58Q8NG06 486 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 TTC8Q8TAM2 541 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 ASNSD1Q9NWL6 643 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 STAP1Q9ULZ2 295 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 TACC3Q9Y6A5 838 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 H0Y626 953 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 ODC1P11926 461 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 EEF1GP26641 437 aaKnown RBP9.59□□□□□ -0.87
CTC1-201ENST00000315684 KRT31Q15323 416 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 EFHC2Q5JST6 749 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 MICALCLQ6ZW33 695 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 DCP1BQ8IZD4 617 aaKnown RBP9.59□□□□□ -0.87
CTC1-201ENST00000315684 CYP2W1Q8TAV3 490 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 HPDLQ96IR7 371 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 TINF2Q9BSI4 451 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 PDE11AQ9HCR9 933 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 PHLPP2Q6ZVD8 1323 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 YDJCA8MPS7 323 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 SMIM22K7EJ46 135 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 STRNO43815 780 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 CEP128Q6ZU80 1094 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 DEPDC1BQ8WUY9 529 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 FAM81BQ96LP2 452 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 RAB17Q9H0T7 212 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 THAP9Q9H5L6 903 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 NEURL4Q96JN8 1562 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 FGFR2P21802 821 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 ATP5DP30049 168 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 FBXW4P57775 412 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 SNRNP35Q16560 246 aaKnown RBP9.59□□□□□ -0.87
CTC1-201ENST00000315684 THEMIS2Q5TEJ8 643 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 GPRASP2Q96D09 838 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 PABPC5Q96DU9 382 aaKnown RBP9.59□□□□□ -0.87
CTC1-201ENST00000315684 PHF20Q9BVI0 1012 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 VPS33BQ9H267 617 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 PLEKHA5Q9HAU0 1116 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 PRMT7Q9NVM4 692 aaPredicted RBP9.59□□□□□ -0.87
CTC1-201ENST00000315684 IMPACTQ9P2X3 320 aa9.59□□□□□ -0.87
CTC1-201ENST00000315684 ATP1A3P13637 1013 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 NFKBIAP25963 317 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 CCDC33Q8N5R6 958 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 AGAP3Q96P47 875 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 SMPD4Q9NXE4 827 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 CLCA2Q9UQC9 943 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.58□□□□□ -0.88
CTC1-201ENST00000315684 CYB561D2O14569 222 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 GFPT1Q06210 699 aaPredicted RBP9.58□□□□□ -0.88
CTC1-201ENST00000315684 DCAF6Q58WW2 860 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 FRA10AC1Q70Z53 315 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 SDCCAG8Q86SQ7 713 aaPredicted RBP9.58□□□□□ -0.88
CTC1-201ENST00000315684 SLC51AQ86UW1 340 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 SGMS1Q86VZ5 419 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 CARNMT1Q8N4J0 409 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 EFHBQ8N7U6 833 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 ADAM2Q99965 735 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 FEZ2Q9UHY8 353 aaPredicted RBP9.58□□□□□ -0.88
CTC1-201ENST00000315684 TTC7AQ9ULT0 858 aaPredicted RBP9.58□□□□□ -0.88
CTC1-201ENST00000315684 G3BP2Q9UN86 482 aaKnown RBP9.58□□□□□ -0.88
CTC1-201ENST00000315684 ASAP2O43150 1006 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 EGFRP00533 1210 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 THP07101 528 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 NCAM1P13591 858 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 GARSP41250 739 aaKnown RBP9.58□□□□□ -0.88
CTC1-201ENST00000315684 CIPCQ9C0C6 399 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 UBE2OQ9C0C9 1292 aaKnown RBP9.58□□□□□ -0.88
CTC1-201ENST00000315684 TBK1Q9UHD2 729 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 RCOR1Q9UKL0 485 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 ESRRBO95718 433 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 SERPING1P05155 500 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 TBXAS1P24557 533 aaPredicted RBP9.58□□□□□ -0.88
CTC1-201ENST00000315684 HARS2P49590 506 aaKnown RBP9.58□□□□□ -0.88
CTC1-201ENST00000315684 TWF1Q12792 350 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 PPP4R3CPQ6ZMV5 832 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 RNF135Q8IUD6 432 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 CDKL2Q92772 493 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 PPP2R2CQ9Y2T4 447 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms