RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ZBTB12Q9Y330 459 aaPredicted RBP15.6■□□□□ 0.09
PTPN9-201ENST00000306726 WDR90Q96KV7 1748 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 SUN1O94901 812 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 ALAS1P13196 640 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 MSH2P43246 934 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 FNTAP49354 379 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 ARHGEF19Q8IW93 802 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 HIPK4Q8NE63 616 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 GINM1Q9NU53 330 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 A0A0G2JND7 137 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 EIF2AK2P19525 551 aaKnown RBP15.6■□□□□ 0.09
PTPN9-201ENST00000306726 MXRA7P84157 204 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 TYW1Q9NV66 732 aaKnown RBP15.6■□□□□ 0.09
PTPN9-201ENST00000306726 COG5Q9UP83 839 aa15.6■□□□□ 0.09
PTPN9-201ENST00000306726 BZW2Q9Y6E2 419 aaKnown RBP15.6■□□□□ 0.09
PTPN9-201ENST00000306726 FSBPO95073 299 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 FGRP09769 529 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 CA4P22748 312 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 SETDB1Q15047 1291 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 PLA2G4FQ68DD2 849 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 ZNF564Q8TBZ8 553 aaPredicted RBP15.59■□□□□ 0.09
PTPN9-201ENST00000306726 SLC5A5Q92911 643 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 CYTH2Q99418 400 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 ZCWPW1Q9H0M4 648 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 ACTR5Q9H9F9 607 aaPredicted RBP15.59■□□□□ 0.09
PTPN9-201ENST00000306726 METTL14Q9HCE5 456 aaKnown RBP15.59■□□□□ 0.09
PTPN9-201ENST00000306726 HERC5Q9UII4 1024 aaKnown RBP15.59■□□□□ 0.09
PTPN9-201ENST00000306726 HAO1Q9UJM8 370 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 BANF1O75531 89 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 KRT10P13645 584 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 ATF2P15336 505 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 ALDH5A1P51649 535 aaPredicted RBP15.59■□□□□ 0.09
PTPN9-201ENST00000306726 XKR9Q5GH70 373 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 PI4KBQ9UBF8 816 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 AGAP1Q9UPQ3 857 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 PIK3R2O00459 728 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 ATP6V1G2O95670 118 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 HNRNPH3P31942 346 aaKnown RBP15.59■□□□□ 0.09
PTPN9-201ENST00000306726 MXI1P50539 228 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 ELF3P78545 371 aaPredicted RBP15.59■□□□□ 0.09
PTPN9-201ENST00000306726 PRKG1Q13976 671 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 ABCB5Q2M3G0 1257 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 HHATQ5VTY9 493 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 RINT1Q6NUQ1 792 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 SPATS2Q86XZ4 545 aaKnown RBP15.59■□□□□ 0.09
PTPN9-201ENST00000306726 SCYL3Q8IZE3 742 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 DAGLBQ8NCG7 672 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 ERP27Q96DN0 273 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 IQCDQ96DY2 449 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 TRIM6Q9C030 488 aaPredicted RBP15.59■□□□□ 0.09
PTPN9-201ENST00000306726 SAYSD1Q9NPB0 183 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 SLCO1B3Q9NPD5 702 aa15.59■□□□□ 0.09
PTPN9-201ENST00000306726 PASKQ96RG2 1323 aa15.58■□□□□ 0.09
PTPN9-201ENST00000306726 EME2A4GXA9 379 aaPredicted RBP15.58■□□□□ 0.09
PTPN9-201ENST00000306726 DDTLA6NHG4 134 aaPredicted RBP15.58■□□□□ 0.09
PTPN9-201ENST00000306726 HIP1RO75146 1068 aa15.58■□□□□ 0.09
PTPN9-201ENST00000306726 BMP3P12645 472 aa15.58■□□□□ 0.09
PTPN9-201ENST00000306726 DRD4P21917 467 aa15.58■□□□□ 0.09
PTPN9-201ENST00000306726 CHKAP35790 457 aa15.58■□□□□ 0.09
PTPN9-201ENST00000306726 MIER3Q7Z3K6 550 aa15.58■□□□□ 0.09
PTPN9-201ENST00000306726 ERICH1Q86X53 443 aa15.58■□□□□ 0.09
PTPN9-201ENST00000306726 CCDC17Q96LX7 622 aa15.58■□□□□ 0.09
PTPN9-201ENST00000306726 AGPAT1Q99943 283 aa15.58■□□□□ 0.09
PTPN9-201ENST00000306726 KCTD10Q9H3F6 313 aa15.58■□□□□ 0.09
PTPN9-201ENST00000306726 CHST7Q9NS84 486 aa15.58■□□□□ 0.09
PTPN9-201ENST00000306726 AIPL1Q9NZN9 384 aa15.58■□□□□ 0.09
PTPN9-201ENST00000306726 MAGED2Q9UNF1 606 aaPredicted RBP15.58■□□□□ 0.09
PTPN9-201ENST00000306726 ZSCAN5DPP0CG00 497 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 RCN2Q14257 317 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 PHLDB3Q6NSJ2 640 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 CYFIP1Q7L576 1253 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 SLFN12Q8IYM2 578 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.58■□□□□ 0.08
PTPN9-201ENST00000306726 CCDC33Q8N5R6 958 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 ZBTB10Q96DT7 871 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 PRMT6Q96LA8 375 aaPredicted RBP15.58■□□□□ 0.08
PTPN9-201ENST00000306726 CSRNP1Q96S65 589 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 PABPC3Q9H361 631 aaKnown RBP15.58■□□□□ 0.08
PTPN9-201ENST00000306726 CDC42EP4Q9H3Q1 356 aaKnown RBP15.58■□□□□ 0.08
PTPN9-201ENST00000306726 MAPK7Q13164 816 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 LRRC36Q1X8D7 754 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 SCFD2Q8WU76 684 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 LRRN4Q8WUT4 740 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 TATDN2Q93075 761 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 ANKFY1Q9P2R3 1169 aa15.58■□□□□ 0.08
PTPN9-201ENST00000306726 WNT10BO00744 389 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 KITP10721 976 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 OSTNP61366 133 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 EPHA7Q15375 998 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 POMGNT1Q8WZA1 660 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 LXNQ9BS40 222 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 TMEM117Q9H0C3 514 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 CDK5RAP2Q96SN8 1893 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 EXOC1LA0A1B0GW35 172 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 BAG2O95816 211 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 ARP10275 920 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 SLC8A1P32418 973 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 NOP14P78316 857 aaKnown RBP15.57■□□□□ 0.08
PTPN9-201ENST00000306726 GPATCH4Q5T3I0 446 aaKnown RBP15.57■□□□□ 0.08
PTPN9-201ENST00000306726 DCAF12L1Q5VU92 463 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms