RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 SEPT1Q8WYJ6 367 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 SH2D3AQ9BRG2 576 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 TMEM39BQ9GZU3 492 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 MAP3K7O43318 606 aa16.89■□□□□ 0.3
USP42-201ENST00000306177 RPSAP08865 295 aaKnown RBP16.89■□□□□ 0.3
USP42-201ENST00000306177 AP1B1Q10567 949 aa16.89■□□□□ 0.3
USP42-201ENST00000306177 TMEM143Q96AN5 459 aa16.89■□□□□ 0.3
USP42-201ENST00000306177 DRC3Q9H069 523 aa16.89■□□□□ 0.3
USP42-201ENST00000306177 BFARQ9NZS9 450 aa16.89■□□□□ 0.3
USP42-201ENST00000306177 BRAFP15056 766 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 SNRNP35Q16560 246 aaKnown RBP16.89■□□□□ 0.29
USP42-201ENST00000306177 RNF219Q5W0B1 726 aaPredicted RBP16.89■□□□□ 0.29
USP42-201ENST00000306177 OR6J1Q8NGC5 347 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 RIT2Q99578 217 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 SMARCAD1Q9H4L7 1026 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 POLIQ9UNA4 740 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 SPECC1L-ADORA2AF8WAN1 911 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 MGEA5O60502 916 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 MYBP10242 640 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 TBC1D1Q86TI0 1168 aaPredicted RBP16.89■□□□□ 0.29
USP42-201ENST00000306177 ELOA2Q8IYF1 753 aaPredicted RBP16.89■□□□□ 0.29
USP42-201ENST00000306177 ATP6V1G3Q96LB4 118 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 GGA3Q9NZ52 723 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 PPLO60437 1756 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 COL3A1P02461 1466 aaPredicted RBP16.89■□□□□ 0.29
USP42-201ENST00000306177 MST1RQ04912 1400 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 ZNF189O75820 626 aaPredicted RBP16.89■□□□□ 0.29
USP42-201ENST00000306177 DRP2Q13474 957 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 FSCBQ5H9T9 825 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 E4F1Q66K89 784 aaPredicted RBP16.89■□□□□ 0.29
USP42-201ENST00000306177 ELMOD1Q8N336 334 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 UPF3AQ9H1J1 476 aaKnown RBP16.89■□□□□ 0.29
USP42-201ENST00000306177 AMACRQ9UHK6 382 aa16.89■□□□□ 0.29
USP42-201ENST00000306177 PXDNQ92626 1479 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 EIF3DO15371 548 aaKnown RBP eCLIP16.88■□□□□ 0.29
USP42-201ENST00000306177 ATP5HO75947 161 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 GYS1P13807 737 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 DPEP1P16444 411 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 AFG1LQ8WV93 481 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 MXRA8Q9BRK3 442 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 EPC1Q9H2F5 836 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 PITPNM2Q9BZ72 1349 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 SKIP12755 728 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 RPA1P27694 616 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 FXR1P51114 621 aaKnown RBP eCLIP16.88■□□□□ 0.29
USP42-201ENST00000306177 KRT17Q04695 432 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 BEND6Q5SZJ8 279 aaPredicted RBP16.88■□□□□ 0.29
USP42-201ENST00000306177 FRA10AC1Q70Z53 315 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 COG1Q8WTW3 980 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 THOC1Q96FV9 657 aaKnown RBP16.88■□□□□ 0.29
USP42-201ENST00000306177 KCNF1Q9H3M0 494 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 AGPAT5Q9NUQ2 364 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.88■□□□□ 0.29
USP42-201ENST00000306177 SUN2Q9UH99 717 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 FBXL5Q9UKA1 691 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 GMNCA6NCL1 334 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 VGLL3A8MV65 326 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 PI4K2BG5E9Z4 385 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 ACOT2P49753 483 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 MDM2Q00987 491 aaPredicted RBP16.88■□□□□ 0.29
USP42-201ENST00000306177 STILQ15468 1287 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 C18orf8Q96DM3 657 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 MYOZ2Q9NPC6 264 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 GMPSP49915 693 aaPredicted RBP16.88■□□□□ 0.29
USP42-201ENST00000306177 EMC2Q15006 297 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 KIF19Q2TAC6 998 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 ATL2Q8NHH9 583 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 SLC35G2Q8TBE7 412 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 VWDEQ8N2E2 1590 aa16.88■□□□□ 0.29
USP42-201ENST00000306177 APOL1O14791 398 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 MAFGO15525 162 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 SSTR3P32745 418 aaPredicted RBP16.87■□□□□ 0.29
USP42-201ENST00000306177 RFC5P40937 340 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 GALCP54803 685 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 NOP9Q86U38 636 aaKnown RBP16.87■□□□□ 0.29
USP42-201ENST00000306177 TTC8Q8TAM2 541 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 ABCF3Q9NUQ8 709 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 WDR35Q9P2L0 1181 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 MAD2L2Q9UI95 211 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 PIN4Q9Y237 131 aaKnown RBP16.87■□□□□ 0.29
USP42-201ENST00000306177 SMIM24O75264 130 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 APOEP02649 317 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 RBP5P82980 135 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 ACAD11Q709F0 780 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 DAGLBQ8NCG7 672 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 KCNB2Q92953 911 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 MAP2P11137 1827 aaKnown RBP16.87■□□□□ 0.29
USP42-201ENST00000306177 NEURL4Q96JN8 1562 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 SNX2O60749 519 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 TADA3O75528 432 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 FGFR2P21802 821 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 ARSEP51690 589 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 SNRPFP62306 86 aaKnown RBP16.87■□□□□ 0.29
USP42-201ENST00000306177 NAA30Q147X3 362 aaPredicted RBP16.87■□□□□ 0.29
USP42-201ENST00000306177 TAF11Q15544 211 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 SLC15A2Q16348 729 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 C1orf228Q6PIY5 440 aa16.87■□□□□ 0.29
USP42-201ENST00000306177 SYDE1Q6ZW31 735 aaPredicted RBP16.87■□□□□ 0.29
USP42-201ENST00000306177 PDCD6IPQ8WUM4 868 aaKnown RBP16.87■□□□□ 0.29
USP42-201ENST00000306177 ZBTB18Q99592 522 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms