RNA–Protein interactions for RNA: ENST00000285679.10

USP25-201, Transcript of ubiquitin specific peptidase 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP25, Length 3,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-201ENST00000285679 C11orf70Q9BRQ4 267 aa16.31■□□□□ 0.2
USP25-201ENST00000285679 TCHPQ9BT92 498 aa16.31■□□□□ 0.2
USP25-201ENST00000285679 MYLK2Q9H1R3 596 aa16.31■□□□□ 0.2
USP25-201ENST00000285679 RXFP1Q9HBX9 757 aa16.31■□□□□ 0.2
USP25-201ENST00000285679 CHST7Q9NS84 486 aa16.31■□□□□ 0.2
USP25-201ENST00000285679 TMEM59LQ9UK28 342 aa16.31■□□□□ 0.2
USP25-201ENST00000285679 CCNL1Q9UK58 526 aaPredicted RBP16.31■□□□□ 0.2
USP25-201ENST00000285679 NAALADL1Q9UQQ1 740 aa16.31■□□□□ 0.2
USP25-201ENST00000285679 SHANK3Q9BYB0 1731 aa16.31■□□□□ 0.2
USP25-201ENST00000285679 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 ESRRAP11474 423 aaPredicted RBP16.3■□□□□ 0.2
USP25-201ENST00000285679 VAMP7P51809 220 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 ORC2Q13416 577 aaPredicted RBP16.3■□□□□ 0.2
USP25-201ENST00000285679 TTC27Q6P3X3 843 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 MIGA2Q7L4E1 593 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 ZNF577Q9BSK1 485 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 GLT8D2Q9H1C3 349 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 RIOX1Q9H6W3 641 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 PAPPAQ13219 1627 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 FAM47DPA6NHR8 397 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 KITP10721 976 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 SKIP12755 728 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 BFSP1Q12934 665 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 DCAF12L1Q5VU92 463 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 ATXN2LQ8WWM7 1075 aaKnown RBP16.3■□□□□ 0.2
USP25-201ENST00000285679 FNBP1Q96RU3 617 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 COG5Q9UP83 839 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 PHLPP1O60346 1717 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 TOGARAM1Q9Y4F4 1720 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 ZCCHC18P0CG32 403 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 KLRC3Q07444 240 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 P3H1Q32P28 736 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 TRMT10CQ7L0Y3 403 aaKnown RBP16.3■□□□□ 0.2
USP25-201ENST00000285679 ACSF2Q96CM8 615 aaPredicted RBP16.3■□□□□ 0.2
USP25-201ENST00000285679 TMEM117Q9H0C3 514 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 WNT8AQ9H1J5 351 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 LTBP4Q8N2S1 1624 aa16.3■□□□□ 0.2
USP25-201ENST00000285679 EME2A4GXA9 379 aaPredicted RBP16.29■□□□□ 0.2
USP25-201ENST00000285679 C5orf60A6NFR6 353 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 SRRM3A6NNA2 597 aaPredicted RBP16.29■□□□□ 0.2
USP25-201ENST00000285679 CES2O00748 559 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 DCTN3O75935 186 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 RPA1P27694 616 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 MFAP3P55082 362 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 PEX3P56589 373 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 BBS9Q3SYG4 887 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 RINT1Q6NUQ1 792 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 SYT2Q8N9I0 419 aaPredicted RBP16.29■□□□□ 0.2
USP25-201ENST00000285679 FAM84AQ96KN4 292 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 NT5C1BQ96P26 610 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 AFF2P51816 1311 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 MYCLP12524 364 aaPredicted RBP16.29■□□□□ 0.2
USP25-201ENST00000285679 ARHGAP27Q6ZUM4 889 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 MIER3Q7Z3K6 550 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 SLC47A2Q86VL8 602 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 ZNF570Q96NI8 536 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 PAGR1Q9BTK6 254 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 PI4K2AQ9BTU6 479 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 COL22A1Q8NFW1 1626 aaPredicted RBP16.29■□□□□ 0.2
USP25-201ENST00000285679 CIB2O75838 187 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 GPS1Q13098 491 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 TTC8Q8TAM2 541 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 JDP2Q8WYK2 163 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 FAM161BQ96MY7 647 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 PAPOLBQ9NRJ5 636 aaKnown RBP16.29■□□□□ 0.2
USP25-201ENST00000285679 STOML1Q9UBI4 398 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 SUGT1Q9Y2Z0 365 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 RPTORQ8N122 1335 aa16.29■□□□□ 0.2
USP25-201ENST00000285679 NUDT17P0C025 328 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 RFC5P40937 340 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 RCN1Q15293 331 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 POMGNT1Q8WZA1 660 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 CENPTQ96BT3 561 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 CFAP57Q96MR6 1250 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 SYNCQ9H7C4 482 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 ADAM22Q9P0K1 906 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 G3BP2Q9UN86 482 aaKnown RBP16.28■□□□□ 0.2
USP25-201ENST00000285679 SLC16A4O15374 487 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 BMP3P12645 472 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 DLG4P78352 724 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 CCDC89Q8N998 374 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 EIF1ADQ8N9N8 165 aaKnown RBP16.28■□□□□ 0.2
USP25-201ENST00000285679 C1orf131Q8NDD1 294 aaKnown RBP16.28■□□□□ 0.2
USP25-201ENST00000285679 DHX38Q92620 1227 aaKnown RBP16.28■□□□□ 0.2
USP25-201ENST00000285679 DNAJC18Q9H819 358 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 PRM3Q9NNZ6 103 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 AGPAT3Q9NRZ7 376 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 GINM1Q9NU53 330 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 COL16A1Q07092 1604 aaPredicted RBP16.28■□□□□ 0.2
USP25-201ENST00000285679 CASZ1Q86V15 1759 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 A0A0A6YYK5 440 aaPredicted RBP16.28■□□□□ 0.2
USP25-201ENST00000285679 NVLO15381 856 aaKnown RBP16.28■□□□□ 0.2
USP25-201ENST00000285679 DDX3YO15523 660 aaKnown RBP16.28■□□□□ 0.2
USP25-201ENST00000285679 RTN2O75298 545 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 RALAP11233 206 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 PRKCIP41743 596 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 PIK3CAP42336 1068 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 RANBP1P43487 201 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 SLC12A3P55017 1021 aa16.28■□□□□ 0.2
USP25-201ENST00000285679 NOP14P78316 857 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms