RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 NAP1L3Q99457 506 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 PITPNM3Q9BZ71 974 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 TANGO6Q9C0B7 1094 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 ZNF180Q9UJW8 692 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 RAD21O60216 631 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 SLURP2P0DP57 97 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 SULT2A1Q06520 285 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 GRM4Q14833 912 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 CCDC84Q86UT8 332 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 CLEC10AQ8IUN9 316 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 ZNF653Q96CK0 615 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 EYA3Q99504 573 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 DDX18Q9NVP1 670 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 KBTBD4Q9NVX7 518 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 ZNF711Q9Y462 761 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 KLRG2A4D1S0 409 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 KIAA0391O15091 583 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 MAP3K7O43318 606 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 STX2P32856 288 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 HOXD12P35452 270 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 PRPF4BQ13523 1007 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 MAN2A1Q16706 1144 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 DCAF12L1Q5VU92 463 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 PEX26Q7Z412 305 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 DAGLAQ9Y4D2 1042 aa16.78■□□□□ 0.28
CTDSP1-201ENST00000273062 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.77■□□□□ 0.28
CTDSP1-201ENST00000273062 DDX3XO00571 662 aaKnown RBP eCLIP16.77■□□□□ 0.283e-13■■■□□ 17.9
CTDSP1-201ENST00000273062 PSMG1O95456 288 aa16.77■□□□□ 0.28
CTDSP1-201ENST00000273062 MLH1P40692 756 aa16.77■□□□□ 0.28
CTDSP1-201ENST00000273062 YARSP54577 528 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-201ENST00000273062 ADARP55265 1226 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-201ENST00000273062 GSTM4Q03013 218 aa16.77■□□□□ 0.28
CTDSP1-201ENST00000273062 TAF1BQ53T94 588 aaPredicted RBP16.77■□□□□ 0.28
CTDSP1-201ENST00000273062 PHLDB3Q6NSJ2 640 aa16.77■□□□□ 0.28
CTDSP1-201ENST00000273062 HEATR3Q7Z4Q2 680 aa16.77■□□□□ 0.28
CTDSP1-201ENST00000273062 MAP7D3Q8IWC1 876 aa16.77■□□□□ 0.28
CTDSP1-201ENST00000273062 SH3TC2Q8TF17 1288 aa16.77■□□□□ 0.28
CTDSP1-201ENST00000273062 FAM81BQ96LP2 452 aa16.77■□□□□ 0.28
CTDSP1-201ENST00000273062 EFR3BQ9Y2G0 817 aa16.77■□□□□ 0.28
CTDSP1-201ENST00000273062 ANKRD31Q8N7Z5 1873 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 LMNAP02545 664 aaKnown RBP16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 RPL21P46778 160 aaKnown RBP16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 SCNN1DP51172 638 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 DNAJC3Q13217 504 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 ZCWPW2Q504Y3 356 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 ZNF362Q5T0B9 420 aaPredicted RBP16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 IZUMO2Q6UXV1 221 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 C16orf86Q6ZW13 317 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 CCDC25Q86WR0 208 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 JAMLQ86YT9 394 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 TPCN2Q8NHX9 752 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 SIKE1Q9BRV8 207 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 TUT1Q9H6E5 874 aaKnown RBP16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 PFDN4Q9NQP4 134 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 AIPL1Q9NZN9 384 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 TMOD4Q9NZQ9 345 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 TBC1D7Q9P0N9 293 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 LTBP1Q14766 1721 aa16.77■□□□□ 0.27
CTDSP1-201ENST00000273062 ATP5HO75947 161 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 ACSL3O95573 720 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 EMP3P54852 163 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 ASIC1P78348 528 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 KLHL30Q0D2K2 578 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 ZNF211Q13398 564 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 GSTA3Q16772 222 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 SYDE2Q5VT97 1194 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 MFSD5Q6N075 450 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 USP17L2Q6R6M4 530 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 C4orf32Q8N8J7 132 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 LZICQ8WZA0 190 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 HAUS1Q96CS2 278 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 CEP95Q96GE4 821 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 NR1H4Q96RI1 486 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 SRPK1Q96SB4 655 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 KCNQ5Q9NR82 932 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 CNOT7Q9UIV1 285 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 ANKRD63C9JTQ0 380 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 EYA4O95677 639 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 PABPC4LP0CB38 370 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 BRAFP15056 766 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 PTENP60484 403 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 MAP7Q14244 749 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 CFAP157Q5JU67 520 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 KIAA1755Q5JYT7 1200 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 SH2D4BQ5SQS7 431 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 AADACL2Q6P093 401 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 BLIDQ8IZY5 108 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 C18orf8Q96DM3 657 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 LSM14BQ9BX40 385 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 DDX4Q9NQI0 724 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 DDX43Q9NXZ2 648 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 HEY1Q9Y5J3 304 aa16.76■□□□□ 0.27
CTDSP1-201ENST00000273062 NAT1P18440 290 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 EIF6P56537 245 aaKnown RBP16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 CDR2Q01850 454 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 SLC44A4Q53GD3 710 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 SP8Q8IXZ3 490 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 PPFIBP2Q8ND30 876 aa16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 PYM1Q9BRP8 204 aaKnown RBP16.75■□□□□ 0.27
CTDSP1-201ENST00000273062 LUC7LQ9NQ29 371 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms