RNA–Protein interactions for RNA: ENST00000270349.11

SLC6A3-201, Transcript of solute carrier family 6 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A3, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3-201ENST00000270349 TNNC2P02585 160 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 PPFIA1Q13136 1202 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 PLEKHA4Q9H4M7 779 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 AMFRQ9UKV5 643 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 DDX3XO00571 662 aaKnown RBP eCLIP12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 MAPK13O15264 365 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 SEC31AO94979 1220 aaKnown RBP12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 STBD1O95210 358 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 LGALS2P05162 132 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 MCM3P25205 808 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 ANXA13P27216 316 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 ARL2P36404 184 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 TMEM63BQ5T3F8 832 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 PLPPR4Q7Z2D5 763 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 SLC20A1Q8WUM9 679 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 FTLP02792 175 aaPredicted RBP12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 PRKCIP41743 596 aa12.69□□□□□ -0.38
SLC6A3-201ENST00000270349 PJA2O43164 708 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 SLC39A4Q6P5W5 647 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 ZNF662Q6ZS27 426 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 PLEKHO2Q8TD55 490 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 DHX38Q92620 1227 aaKnown RBP12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 TATDN2Q93075 761 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 SMARCAL1Q9NZC9 954 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 DAAM1Q9Y4D1 1078 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 TOM1L1O75674 476 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 SGPL1O95470 568 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 CD58P19256 250 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 MRPS25P82663 173 aaKnown RBP12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 ASTE1Q2TB18 679 aaPredicted RBP12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 MAP9Q49MG5 647 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 ATF7IP2Q5U623 682 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 PAPD7Q5XG87 772 aaKnown RBP12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 C8orf74Q6P047 294 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 NOA1Q8NC60 698 aaKnown RBP12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 COG1Q8WTW3 980 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 ZNF653Q96CK0 615 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 H3BRB1 525 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 TNPO2O14787 897 aaKnown RBP12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 SPOPO43791 374 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 ZMYND10O75800 440 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 LCA5LO95447 670 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 ZBTB48P10074 688 aaPredicted RBP12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 SCP2P22307 547 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 TNFAIP2Q03169 654 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 EPC2Q52LR7 807 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 SCARA5Q6ZMJ2 495 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 DPH6Q7L8W6 267 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 AFAP1L1Q8TED9 768 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 ADPGKQ9BRR6 497 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 TINF2Q9BSI4 451 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 AP5M1Q9H0R1 490 aa12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 TUT1Q9H6E5 874 aaKnown RBP12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 RPF1Q9H9Y2 349 aaKnown RBP12.68□□□□□ -0.38
SLC6A3-201ENST00000270349 VTNP04004 478 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 JAM2P57087 298 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 MOGSQ13724 837 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 FAM110CQ1W6H9 321 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 ODF2Q5BJF6 829 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 TMEM270Q6UE05 265 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 SEMA4DQ92854 862 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 ANKRD36BP1Q96IX9 119 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 ABHD16BQ9H3Z7 469 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 RNPEPQ9H4A4 650 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 ACP6Q9NPH0 428 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 DNAJC25-GNG10A0A024R161 153 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 MAGEB2O15479 319 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 ZEB2O60315 1214 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 GTF2H1P32780 548 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 TMEM62Q0P6H9 643 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 ACVR2BQ13705 512 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 MESDQ14696 234 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 ZNF484Q5JVG2 852 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 PRAMEF19Q5SWL8 479 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 SPOPLQ6IQ16 392 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 PHLDB2Q86SQ0 1253 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 KLHL7Q8IXQ5 586 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 FAM81BQ96LP2 452 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 MFSD14AQ96MC6 490 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 EHD2Q9NZN4 543 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 NXF1Q9UBU9 619 aaKnown RBP12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 SALL4Q9UJQ4 1053 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 RBBP6Q7Z6E9 1792 aaKnown RBP12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 CD19P15391 556 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 NCOA4Q13772 614 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 DGKDQ16760 1214 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 PPP1R13LQ8WUF5 828 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 RFFLQ8WZ73 363 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 MS4A4AQ96JQ5 239 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 TRIM6Q9C030 488 aaPredicted RBP12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 ACBD3Q9H3P7 528 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 PDLIM7Q9NR12 457 aa12.67□□□□□ -0.38
SLC6A3-201ENST00000270349 MCM3APO60318 1980 aa12.66□□□□□ -0.38
SLC6A3-201ENST00000270349 RBAK-RBAKDNI3L0D1 243 aa12.66□□□□□ -0.38
SLC6A3-201ENST00000270349 ASAP2O43150 1006 aa12.66□□□□□ -0.38
SLC6A3-201ENST00000270349 MYL3P08590 195 aa12.66□□□□□ -0.38
SLC6A3-201ENST00000270349 GPC3P51654 580 aa12.66□□□□□ -0.38
SLC6A3-201ENST00000270349 BPIFB4P59827 614 aa12.66□□□□□ -0.38
SLC6A3-201ENST00000270349 HSP90B2PQ58FF3 399 aa12.66□□□□□ -0.38
SLC6A3-201ENST00000270349 ZBTB41Q5SVQ8 909 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms