RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ZC2HC1CQ53FD0 456 aaPredicted RBP17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CWF19L1Q69YN2 538 aaKnown RBP17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 USP50Q70EL3 339 aaPredicted RBP17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 DRAXINQ8NBI3 349 aaPredicted RBP17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 FAM210AQ96ND0 272 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 SLITRK6Q9H5Y7 841 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 AZI2Q9H6S1 392 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 INTS9Q9NV88 658 aaKnown RBP17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 LIN7AO14910 233 aaPredicted RBP17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 NMT1P30419 496 aaKnown RBP17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 KCNH2Q12809 1159 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 RINT1Q6NUQ1 792 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 DAAM2Q86T65 1068 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 TPCN2Q8NHX9 752 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ATP8B4Q8TF62 1192 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 SEC14L1Q92503 715 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 LPAR1Q92633 364 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 HSD17B14Q9BPX1 270 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ZCWPW1Q9H0M4 648 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 EPB41L4BQ9H329 900 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 SLC38A10Q9HBR0 1119 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 DPPA5A6NC42 116 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 BTNL10A8MVZ5 291 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 TBCAO75347 108 aaKnown RBP17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PSMD10O75832 226 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 RARAP10276 462 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 COPB2P35606 906 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 NCALDP61601 193 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 KNOP1Q1ED39 458 aaKnown RBP17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CEP55Q53EZ4 464 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 DCAF17Q5H9S7 520 aaPredicted RBP17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 TCERG1LQ5VWI1 586 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 TRIM68Q6AZZ1 485 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ADAT2Q7Z6V5 191 aaKnown RBP17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 FAM160B2Q86V87 743 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 KIF2BQ8N4N8 673 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 UHMK1Q8TAS1 419 aaKnown RBP17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 TXLNGYQ9BZA5 131 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 MRPL11Q9Y3B7 192 aaKnown RBP17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 IGF2BP3O00425 579 aaKnown RBP eCLIP17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 EIF2AK2P19525 551 aaKnown RBP17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CCND1P24385 295 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 TMEM132BQ14DG7 1078 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 SNRNP48Q6IEG0 339 aaKnown RBP17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 MYCT1Q8N699 235 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 KCNV2Q8TDN2 545 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CEP63Q96MT8 703 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 SH2D3AQ9BRG2 576 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ZNF577Q9BSK1 485 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 AS3MTQ9HBK9 375 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 NAGPAQ9UK23 515 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PCDHB13Q9Y5F0 798 aa17.11■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ICAM1P05362 532 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 SLC9A1P19634 815 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 IFI16Q16666 785 aaKnown RBP17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 UBAP2Q5T6F2 1119 aaKnown RBP17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 RASGEF1CQ8N431 466 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CLEC4DQ8WXI8 215 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 GANQ9H2C0 597 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ECT2Q9H8V3 914 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 TMOD4Q9NZQ9 345 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 STK38LQ9Y2H1 464 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 MAP3K13O43283 966 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 AKAP3O75969 853 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 EYA4O95677 639 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 FGGP02679 453 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 FERP16591 822 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PMS2P54278 862 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 LAMB3Q13751 1172 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ALKBH5Q6P6C2 394 aaKnown RBP17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 IRF2BP2Q7Z5L9 587 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 RNF25Q96BH1 459 aaPredicted RBP17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 OPTNQ96CV9 577 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 POLR3CQ9BUI4 534 aaPredicted RBP17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 UNC45AQ9H3U1 944 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PIDD1Q9HB75 910 aa17.1■□□□□ 0.33
MAP1LC3B-201ENST00000268607 FAM170AA1A519 330 aa17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 RGS16O15492 202 aaPredicted RBP17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 IREB2P48200 963 aaKnown RBP17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 RPS6P62753 249 aaKnown RBP17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 POU5F1Q01860 360 aaKnown RBP17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 MFN1Q8IWA4 741 aa17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 RPUSD2Q8IZ73 545 aaKnown RBP17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 TAAR1Q96RJ0 339 aa17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 HTTP42858 3142 aa17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 TULP1O00294 542 aaPredicted RBP17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 FAM13AO94988 1023 aa17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 KRT16P08779 473 aa17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 SLCO1A2P46721 670 aa17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 COG2Q14746 738 aa17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 TAF11Q15544 211 aa17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CCDC113Q9H0I3 377 aa17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ARMCX3Q9UH62 379 aaPredicted RBP17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PPP2R3BQ9Y5P8 575 aa17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 RPS6KL1Q9Y6S9 549 aa17.09■□□□□ 0.33
MAP1LC3B-201ENST00000268607 DOCK1Q14185 1865 aa17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 LUC7L3O95232 432 aaKnown RBP17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ATP2A2P16615 1042 aaKnown RBP17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 GJA5P36382 358 aa17.08■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PLTPP55058 493 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms