RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 ELOA2Q8IYF1 753 aaPredicted RBP20.03■□□□□ 0.8
SDF4-201ENST00000263741 NOC3LQ8WTT2 800 aaKnown RBP20.03■□□□□ 0.8
SDF4-201ENST00000263741 POMGNT1Q8WZA1 660 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 SAAL1Q96ER3 474 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 PCIF1Q9H4Z3 704 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 CERS4Q9HA82 394 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 MSRAQ9UJ68 235 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 MRPL42Q9Y6G3 142 aaKnown RBP20.03■□□□□ 0.8
SDF4-201ENST00000263741 A0A0B4J269 797 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 MEFVO15553 781 aaPredicted RBP20.03■□□□□ 0.8
SDF4-201ENST00000263741 OFD1O75665 1012 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 RAB30Q15771 203 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 BMT2Q1RMZ1 405 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 GLB1LQ6UWU2 654 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 TIFAQ96CG3 184 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 TMEM206Q9H813 350 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 RMND1Q9NWS8 449 aa20.03■□□□□ 0.8
SDF4-201ENST00000263741 TRANK1O15050 2925 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 ATG2AQ2TAZ0 1938 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 LINC01553A4QN01 128 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 ARL5CA6NH57 179 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 CLIC2O15247 247 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 FAM189A1O60320 539 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 B4GALT3O60512 393 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 POMCP01189 267 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 BMP6P22004 513 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 ACOT2P49753 483 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 SCNN1GP51170 649 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 GLRA4Q5JXX5 417 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 PPP2R2DQ66LE6 453 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 LRRC55Q6ZSA7 311 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 FAM43BQ6ZT52 329 aaPredicted RBP20.02■□□□□ 0.8
SDF4-201ENST00000263741 SP7Q8TDD2 431 aaPredicted RBP20.02■□□□□ 0.8
SDF4-201ENST00000263741 TMEM117Q9H0C3 514 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 GBP3Q9H0R5 595 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 RRAGDQ9NQL2 400 aaPredicted RBP20.02■□□□□ 0.8
SDF4-201ENST00000263741 MIOSQ9NXC5 875 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 PLAGL2Q9UPG8 496 aa20.02■□□□□ 0.8
SDF4-201ENST00000263741 GOLGA8IPA6NC78 632 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 GOLGA8JA6NMD2 632 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 CXCL8P10145 99 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 GRM5P41594 1212 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 KNOP1Q1ED39 458 aaKnown RBP20.01■□□□□ 0.79
SDF4-201ENST00000263741 ZNF658Q5TYW1 1059 aaPredicted RBP20.01■□□□□ 0.79
SDF4-201ENST00000263741 ARMCX5Q6P1M9 558 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 HACE1Q8IYU2 909 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 ANP32BQ92688 251 aaKnown RBP20.01■□□□□ 0.79
SDF4-201ENST00000263741 TRIM44Q96DX7 344 aaPredicted RBP20.01■□□□□ 0.79
SDF4-201ENST00000263741 KIAA1468Q9P260 1216 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 MBD3O95983 291 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 PBX3P40426 434 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 TAP1Q03518 808 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 NOMO2Q5JPE7 1267 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 APBB1IPQ7Z5R6 666 aaPredicted RBP20.01■□□□□ 0.79
SDF4-201ENST00000263741 CMTR2Q8IYT2 770 aaKnown RBP20.01■□□□□ 0.79
SDF4-201ENST00000263741 CCDC94Q9BW85 323 aaPredicted RBP20.01■□□□□ 0.79
SDF4-201ENST00000263741 AGPAT3Q9NRZ7 376 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 TBC1D13Q9NVG8 400 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 CACNG4Q9UBN1 327 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 AGO2Q9UKV8 859 aaKnown RBP20.01■□□□□ 0.79
SDF4-201ENST00000263741 STYXL1Q9Y6J8 313 aa20.01■□□□□ 0.79
SDF4-201ENST00000263741 TULP1O00294 542 aaPredicted RBP20■□□□□ 0.79
SDF4-201ENST00000263741 OGTO15294 1046 aa20■□□□□ 0.79
SDF4-201ENST00000263741 HOXA2O43364 376 aa20■□□□□ 0.79
SDF4-201ENST00000263741 PRCPP42785 496 aa20■□□□□ 0.79
SDF4-201ENST00000263741 TMEM130Q8N3G9 435 aa20■□□□□ 0.79
SDF4-201ENST00000263741 GSTCDQ8NEC7 633 aa20■□□□□ 0.79
SDF4-201ENST00000263741 C17orf80Q9BSJ5 609 aa20■□□□□ 0.79
SDF4-201ENST00000263741 KCTD10Q9H3F6 313 aa20■□□□□ 0.79
SDF4-201ENST00000263741 SLC28A3Q9HAS3 691 aa20■□□□□ 0.79
SDF4-201ENST00000263741 TYW1Q9NV66 732 aaKnown RBP20■□□□□ 0.79
SDF4-201ENST00000263741 RNF216Q9NWF9 866 aaPredicted RBP20■□□□□ 0.79
SDF4-201ENST00000263741 LINC00271P0C7V0 271 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 CD44P16070 742 aaKnown RBP19.99■□□□□ 0.79
SDF4-201ENST00000263741 CYP2J2P51589 502 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 SPAG1Q07617 926 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 LRRC43Q8N309 656 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 FIBCD1Q8N539 461 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 FAM161BQ96MY7 647 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 FAM213AQ9BRX8 229 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 PTGESO14684 152 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 MORC3Q14149 939 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 ZNF280BQ86YH2 543 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 ACAP3Q96P50 834 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 RPS6KC1Q96S38 1066 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 TMEM63CQ9P1W3 806 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 GIT1Q9Y2X7 761 aa19.99■□□□□ 0.79
SDF4-201ENST00000263741 CLCN1P35523 988 aa19.98■□□□□ 0.79
SDF4-201ENST00000263741 ENOX2Q16206 610 aaKnown RBP19.98■□□□□ 0.79
SDF4-201ENST00000263741 SPOUT1Q5T280 376 aaKnown RBP19.98■□□□□ 0.79
SDF4-201ENST00000263741 SLFN12LQ6IEE8 588 aa19.98■□□□□ 0.79
SDF4-201ENST00000263741 HS2ST1Q7LGA3 356 aa19.98■□□□□ 0.79
SDF4-201ENST00000263741 URGCPQ8TCY9 931 aa19.98■□□□□ 0.79
SDF4-201ENST00000263741 FAM212AQ96EL1 285 aa19.98■□□□□ 0.79
SDF4-201ENST00000263741 SNX27Q96L92 541 aa19.98■□□□□ 0.79
SDF4-201ENST00000263741 TTYH1Q9H313 450 aaPredicted RBP19.98■□□□□ 0.79
SDF4-201ENST00000263741 CWH43Q9H720 699 aa19.98■□□□□ 0.79
SDF4-201ENST00000263741 DNAJB4Q9UDY4 337 aa19.98■□□□□ 0.79
SDF4-201ENST00000263741 FXR1P51114 621 aaKnown RBP eCLIP19.98■□□□□ 0.79
SDF4-201ENST00000263741 WNT7BP56706 349 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms