RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 OR6B3Q8NGW1 331 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 DEFB129Q9H1M3 183 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 NDFIP2Q9NV92 336 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 UBA6A0AVT1 1052 aaPredicted RBP13.6□□□□□ -0.23
TTC39A-202ENST00000262676 COPB2P35606 906 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 MXI1P50539 228 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 TMEM62Q0P6H9 643 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 KHDRBS2Q5VWX1 349 aaKnown RBP13.6□□□□□ -0.23
TTC39A-202ENST00000262676 CDR2LQ86X02 465 aaPredicted RBP13.6□□□□□ -0.23
TTC39A-202ENST00000262676 MB21D1Q8N884 522 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 OTUB1Q96FW1 271 aaPredicted RBP13.6□□□□□ -0.23
TTC39A-202ENST00000262676 TMEM245Q9H330 911 aa13.6□□□□□ -0.23
TTC39A-202ENST00000262676 NNMTP40261 264 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 FKBP3Q00688 224 aaKnown RBP13.59□□□□□ -0.23
TTC39A-202ENST00000262676 KDSRQ06136 332 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 HIC1Q14526 733 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 ZMYM1Q5SVZ6 1142 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 BARGINQ6ZT62 677 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 C11orf74Q86VG3 221 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 MEFVO15553 781 aaPredicted RBP13.59□□□□□ -0.23
TTC39A-202ENST00000262676 MYO1DO94832 1006 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 FASTKD1Q53R41 847 aaKnown RBP13.59□□□□□ -0.23
TTC39A-202ENST00000262676 CCDC157Q569K6 752 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 STAMBPL1Q96FJ0 436 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 RPF1Q9H9Y2 349 aaKnown RBP13.59□□□□□ -0.23
TTC39A-202ENST00000262676 LAD1O00515 517 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 TBC1D4O60343 1298 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 SLC39A14Q15043 492 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 GFM2Q969S9 779 aaKnown RBP13.59□□□□□ -0.23
TTC39A-202ENST00000262676 PANX2Q96RD6 677 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 MRPS26Q9BYN8 205 aaKnown RBP13.59□□□□□ -0.23
TTC39A-202ENST00000262676 UNC45AQ9H3U1 944 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 ZNF70Q9UC06 446 aaPredicted RBP13.59□□□□□ -0.23
TTC39A-202ENST00000262676 SSH2Q76I76 1423 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 H7C1W4 665 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 AKAP10O43572 662 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 BRAFP15056 766 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 SMARCA1P28370 1054 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 ARMCX2Q7L311 632 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 ZNF513Q8N8E2 541 aaPredicted RBP13.59□□□□□ -0.23
TTC39A-202ENST00000262676 ZKSCAN4Q969J2 545 aaPredicted RBP13.59□□□□□ -0.23
TTC39A-202ENST00000262676 BTKQ06187 659 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 KRT39Q6A163 491 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 CLEC4FQ8N1N0 589 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 ADAMTS1Q9UHI8 967 aa13.59□□□□□ -0.23
TTC39A-202ENST00000262676 MROH7-TTC4A0A0A0MT08 1334 aa13.58□□□□□ -0.23
TTC39A-202ENST00000262676 A0A1W2PQ27 194 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 A0A1W2PQ64 194 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 A0A1W2PQD8 194 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 RAB14P61106 215 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 LRRC74AQ0VAA2 488 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 USP17L6PQ6QN14 398 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 NUDT18Q6ZVK8 323 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 LONP2Q86WA8 852 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 GALNT4Q8N4A0 578 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 TMA16Q96EY4 203 aaKnown RBP13.58□□□□□ -0.24
TTC39A-202ENST00000262676 IL17RAQ96F46 866 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 PRMT1Q99873 361 aaKnown RBP13.58□□□□□ -0.24
TTC39A-202ENST00000262676 ZSWIM5Q9P217 1185 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 SESN1Q9Y6P5 492 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 NFIBO00712 420 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 CIITAP33076 1130 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 ZNF211Q13398 564 aaPredicted RBP13.58□□□□□ -0.24
TTC39A-202ENST00000262676 TLK2Q86UE8 772 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 CCDC103Q8IW40 242 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 KCTD17Q8N5Z5 321 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 PIGOQ8TEQ8 1089 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 PBXIP1Q96AQ6 731 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 DTNBP1Q96EV8 351 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 EXOSC4Q9NPD3 245 aaKnown RBP13.58□□□□□ -0.24
TTC39A-202ENST00000262676 FCGRTP55899 365 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 TAS2R42Q7RTR8 314 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 PGBD3Q8N328 593 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 CEP95Q96GE4 821 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 FOXP1Q9H334 677 aaPredicted RBP13.58□□□□□ -0.24
TTC39A-202ENST00000262676 STXBP3O00186 592 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 TXNP10599 105 aaKnown RBP13.58□□□□□ -0.24
TTC39A-202ENST00000262676 KCNA3P22001 575 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 ALKBH5Q6P6C2 394 aaKnown RBP13.58□□□□□ -0.24
TTC39A-202ENST00000262676 COG1Q8WTW3 980 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 AGBL1Q96MI9 1066 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 WDR11Q9BZH6 1224 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 ACAD9Q9H845 621 aa13.58□□□□□ -0.24
TTC39A-202ENST00000262676 SPDYE5A6NIY4 337 aa13.57□□□□□ -0.24
TTC39A-202ENST00000262676 XPO1O14980 1071 aaKnown RBP13.57□□□□□ -0.24
TTC39A-202ENST00000262676 NCK2O43639 380 aa13.57□□□□□ -0.24
TTC39A-202ENST00000262676 CENPAP49450 140 aa13.57□□□□□ -0.24
TTC39A-202ENST00000262676 PDIA2Q13087 525 aaKnown RBP13.57□□□□□ -0.24
TTC39A-202ENST00000262676 SPDYE7PQ495Y7 208 aa13.57□□□□□ -0.24
TTC39A-202ENST00000262676 MSTO1Q9BUK6 570 aa13.57□□□□□ -0.24
TTC39A-202ENST00000262676 LSG1Q9H089 658 aaKnown RBP13.57□□□□□ -0.24
TTC39A-202ENST00000262676 CFAP73A6NFT4 308 aa13.57□□□□□ -0.24
TTC39A-202ENST00000262676 CETPP11597 493 aa13.57□□□□□ -0.24
TTC39A-202ENST00000262676 ARID5BQ14865 1188 aa13.57□□□□□ -0.24
TTC39A-202ENST00000262676 RABGAP1LQ5R372 815 aa13.57□□□□□ -0.24
TTC39A-202ENST00000262676 THEMIS2Q5TEJ8 643 aa13.57□□□□□ -0.24
TTC39A-202ENST00000262676 HEATR4Q86WZ0 1026 aa13.57□□□□□ -0.24
TTC39A-202ENST00000262676 ZBED8Q8IZ13 594 aa13.57□□□□□ -0.24
TTC39A-202ENST00000262676 NSUN6Q8TEA1 469 aaKnown RBP13.57□□□□□ -0.24
TTC39A-202ENST00000262676 NDEL1Q9GZM8 345 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms