RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 BRSK2Q8IWQ3 736 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 ANKRD7Q92527 254 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 RUSC1Q9BVN2 902 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 FRMD8Q9BZ67 464 aaPredicted RBP8.81□□□□□ -1
PTPN3-201ENST00000262539 NAGPAQ9UK23 515 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 ASTN2O75129 1339 aaPredicted RBP8.81□□□□□ -1
PTPN3-201ENST00000262539 ACKR2O00590 384 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 CYP2C8P10632 490 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 HOXD10P28358 340 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 CASP1P29466 404 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 PNPLA4P41247 253 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 DCAF4L1Q3SXM0 396 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 KIAA1841Q6NSI8 718 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 C11orf63Q6NUN7 778 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 GCNAQ96QF7 691 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 TTYH3Q9C0H2 523 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 LMCD1Q9NZU5 365 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 PCDHGC5Q9Y5F6 944 aa8.81□□□□□ -1
PTPN3-201ENST00000262539 CLTAP09496 248 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 PPP4R4Q6NUP7 873 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 GCOM2Q9BZD3 368 aaPredicted RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 HSD3B7Q9H2F3 369 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 TNRC6CQ9HCJ0 1690 aaKnown RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 TYW5A2RUC4 315 aaKnown RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 VIMP08670 466 aaKnown RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 MCL1Q07820 350 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 TMEM139Q8IV31 216 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 CGRRF1Q99675 332 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 WNT8AQ9H1J5 351 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 PORCNQ9H237 461 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 DONSONQ9NYP3 566 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 Q9Y3F1 56 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 RGPD3A6NKT7 1758 aaPredicted RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 RGPD4Q7Z3J3 1758 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 KCNA3P22001 575 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 ARHGAP25P42331 645 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 NPTX2P47972 431 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 HADHBP55084 474 aaKnown RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 RAD51AP2Q09MP3 1159 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 DHX34Q14147 1143 aaKnown RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 DRAP1Q14919 205 aaPredicted RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 SLMAPQ14BN4 828 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 SPATS2Q86XZ4 545 aaKnown RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 FBXL18Q96ME1 805 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 SEPT10Q9P0V9 454 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 PGAP2Q9UHJ9 254 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 USP20Q9Y2K6 914 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 A0A0G2JLL6 359 aaPredicted RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 NMT1P30419 496 aaKnown RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 CHRNA3P32297 505 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 TFDP2Q14188 446 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 KCNK18Q7Z418 384 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 PRRT2Q7Z6L0 340 aaPredicted RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 NIF3L1Q9GZT8 377 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 RTN2O75298 545 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 AKAP3O75969 853 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 ERCC3P19447 782 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 DCUN1D2Q6PH85 259 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 PLEKHH3Q7Z736 793 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 CEP104O60308 925 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 RWDD2BP57060 319 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 MUM1L1Q5H9M0 696 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 C1orf228Q6PIY5 440 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 PDZD4Q76G19 769 aaPredicted RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 FAM71BQ8TC56 605 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 SHC3Q92529 594 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 NUDT12Q9BQG2 462 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 RPF1Q9H9Y2 349 aaKnown RBP8.8□□□□□ -1
PTPN3-201ENST00000262539 RAB20Q9NX57 234 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 ARHGAP28Q9P2N2 729 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 SNCAIPQ9Y6H5 919 aa8.8□□□□□ -1
PTPN3-201ENST00000262539 INO80B-WBP1J3KQ70 363 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 SLC16A4O15374 487 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 TCEAL1Q15170 157 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 WDR49Q8IV35 697 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 HAUS1Q96CS2 278 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 ITM2BQ9Y287 266 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 PASKQ96RG2 1323 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 CCL15-CCL14A0A0B4J2E2 113 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 MAFO75444 373 aaPredicted RBP8.79□□□□□ -1
PTPN3-201ENST00000262539 CCL15Q16663 113 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 SPDYCQ5MJ68 293 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 ACRBPQ8NEB7 543 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 CCDC127Q96BQ5 260 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 SHISA4Q96DD7 197 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 TTC7AQ9ULT0 858 aaPredicted RBP8.79□□□□□ -1
PTPN3-201ENST00000262539 RNF8O76064 485 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 EDNRBP24530 442 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 RGS2P41220 211 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 UBXN2AP68543 259 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 BSPRYQ5W0U4 402 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.79□□□□□ -1
PTPN3-201ENST00000262539 AGPAT1Q99943 283 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 ASCC2Q9H1I8 757 aaPredicted RBP8.79□□□□□ -1
PTPN3-201ENST00000262539 DHX33Q9H6R0 707 aaKnown RBP8.79□□□□□ -1
PTPN3-201ENST00000262539 RAB21Q9UL25 225 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 PRKCBP05771 671 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 ZNF135P52742 658 aaPredicted RBP8.79□□□□□ -1
PTPN3-201ENST00000262539 ELF2Q15723 593 aa8.79□□□□□ -1
PTPN3-201ENST00000262539 MIIPQ5JXC2 388 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms