RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 NME8Q8N427 588 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 LMO3Q8TAP4 145 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 GCOM2Q9BZD3 368 aaPredicted RBP10.27□□□□□ -0.77
NIP7-202ENST00000254941 NUCKS1Q9H1E3 243 aaKnown RBP10.27□□□□□ -0.77
NIP7-202ENST00000254941 SIX2Q9NPC8 291 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 KCND1Q9NSA2 647 aa10.27□□□□□ -0.77
NIP7-202ENST00000254941 ACTN1P12814 892 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 ARF4P18085 180 aaPredicted RBP10.26□□□□□ -0.77
NIP7-202ENST00000254941 MXI1P50539 228 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 CDK17Q00537 523 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 APBA1Q02410 837 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 TMEM62Q0P6H9 643 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 ZNF568Q3ZCX4 644 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 ZBTB41Q5SVQ8 909 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 E4F1Q66K89 784 aaPredicted RBP10.26□□□□□ -0.77
NIP7-202ENST00000254941 CYP26C1Q6V0L0 522 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 ZBTB33Q86T24 672 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 POP1Q99575 1024 aaKnown RBP10.26□□□□□ -0.77
NIP7-202ENST00000254941 TMEM117Q9H0C3 514 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 CDHR5Q9HBB8 845 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 TMEM8AQ9HCN3 771 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 SPTLC3Q9NUV7 552 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 WBP1LQ9NX94 342 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 RBAKQ9NYW8 714 aaPredicted RBP10.26□□□□□ -0.77
NIP7-202ENST00000254941 COQ4Q9Y3A0 265 aa10.26□□□□□ -0.77
NIP7-202ENST00000254941 A0A1B0GUA9 196 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 SOWAHDA6NJG2 315 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 TSPAN1O60635 241 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 CABYRO75952 493 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 ERLIN2O94905 339 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 DLATP10515 647 aaKnown RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 HARSP12081 509 aaKnown RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 DARSP14868 501 aaKnown RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 EIF4BP23588 611 aaKnown RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 TMEM132AQ24JP5 1023 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 EPC2Q52LR7 807 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 EEF1DP3Q658K8 133 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 KRT39Q6A163 491 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 GDF6Q6KF10 455 aaPredicted RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 RRAGAQ7L523 313 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 C17orf53Q8N3J3 647 aaPredicted RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 EHBP1Q8NDI1 1231 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 SYN2Q92777 582 aaPredicted RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 FNBP1Q96RU3 617 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 TSEN34Q9BSV6 310 aaKnown RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 CDT1Q9H211 546 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 PDZD7Q9H5P4 517 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 PDE11AQ9HCR9 933 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 NLRC4Q9NPP4 1024 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 ZNHIT6Q9NWK9 470 aaKnown RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 CPSF3Q9UKF6 684 aaKnown RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 MYO6Q9UM54 1294 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 GINS2Q9Y248 185 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 DAAM1Q9Y4D1 1078 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 GRIN2DO15399 1336 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 RALGAPA2Q2PPJ7 1873 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 MOXD2PA6NHM9 499 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 LRRC53A6NM62 1247 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 RPLP2P05387 115 aaKnown RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 TNFSF9P41273 254 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 ACLYP53396 1101 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 CRYBB1P53674 252 aaPredicted RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 WNT7BP56706 349 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 POU5F1Q01860 360 aaKnown RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 SEZ6Q53EL9 994 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 FAM47CQ5HY64 1035 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 PDXDC1Q6P996 788 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 C15orf39Q6ZRI6 1047 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 SV2AQ7L0J3 742 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 RPAINQ86UA6 219 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 SERINC5Q86VE9 423 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 CDR2LQ86X02 465 aaPredicted RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 BRSK2Q8IWQ3 736 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 ZNF516Q92618 1163 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 OSMRQ99650 979 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 CHP1Q99653 195 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 INTS2Q9H0H0 1204 aaKnown RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 RRAGDQ9NQL2 400 aaPredicted RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 TOPORSQ9NS56 1045 aaPredicted RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 APEX2Q9UBZ4 518 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 FHOD1Q9Y613 1164 aa10.25□□□□□ -0.77
NIP7-202ENST00000254941 PDCD11Q14690 1871 aaKnown RBP10.25□□□□□ -0.77
NIP7-202ENST00000254941 MCF2P10911 925 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 TNNI1P19237 187 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 RFX1P22670 979 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 HOXA11P31270 313 aaPredicted RBP10.24□□□□□ -0.77
NIP7-202ENST00000254941 NCBP1Q09161 790 aaKnown RBP10.24□□□□□ -0.77
NIP7-202ENST00000254941 ITGA7Q13683 1181 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 MTF1Q14872 753 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 SNX17Q15036 470 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 SURF1Q15526 300 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 ZACNQ401N2 412 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 RAD9BQ6WBX8 426 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 THNSL1Q8IYQ7 743 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 CCAR2Q8N163 923 aaKnown RBP10.24□□□□□ -0.77
NIP7-202ENST00000254941 FBXL13Q8NEE6 735 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 TMEM40Q8WWA1 233 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 CPB2Q96IY4 423 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 AIPL1Q9NZN9 384 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 PCDH10Q9P2E7 1040 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms