RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 NIPA1Q7RTP0 329 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 CHST13Q8NET6 341 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 P3H4Q92791 437 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 XPO6Q96QU8 1125 aaKnown RBP18.26■□□□□ 0.51
FOXA1-201ENST00000250448 TUFT1Q9NNX1 390 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 HAUS2Q9NVX0 235 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 CLIC2O15247 247 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 TMEM253P0C7T8 217 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 RINT1Q6NUQ1 792 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 FUKQ8N0W3 1084 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 SAMD3Q8N6K7 520 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 SLC35G2Q8TBE7 412 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 FAM129AQ9BZQ8 928 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 DIS3Q9Y2L1 958 aaKnown RBP18.26■□□□□ 0.51
FOXA1-201ENST00000250448 PCDHB13Q9Y5F0 798 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 IGSF9BQ9UPX0 1349 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 GCNT3O95395 438 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 SOX5P35711 763 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 DR1Q01658 176 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 PRPF4BQ13523 1007 aaKnown RBP18.25■□□□□ 0.51
FOXA1-201ENST00000250448 SNCBQ16143 134 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 PREPLQ4J6C6 727 aaPredicted RBP18.25■□□□□ 0.51
FOXA1-201ENST00000250448 SEPT14Q6ZU15 432 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 FASTKD5Q7L8L6 764 aaKnown RBP18.25■□□□□ 0.51
FOXA1-201ENST00000250448 GLYCTKQ8IVS8 523 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 PARP9Q8IXQ6 854 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 CENPTQ96BT3 561 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 CAND2O75155 1236 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 TBCAO75347 108 aaKnown RBP18.25■□□□□ 0.51
FOXA1-201ENST00000250448 PPP2R5EQ16537 467 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 ERMARDQ5T6L9 678 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 DUPD1Q68J44 220 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 MDM1Q8TC05 714 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 CHMP6Q96FZ7 201 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 SGSM3Q96HU1 749 aa18.25■□□□□ 0.51
FOXA1-201ENST00000250448 GOLGA6L10A0A0M3HER8 536 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 SOWAHBA6NEL2 793 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 RPAINQ86UA6 219 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 CTNNBL1Q8WYA6 563 aaPredicted RBP18.24■□□□□ 0.51
FOXA1-201ENST00000250448 CARD9Q9H257 536 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 EPB41L4BQ9H329 900 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 ZDHHC18Q9NUE0 388 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 TCEAL9Q9UHQ7 104 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 CCL15-CCL14A0A0B4J2E2 113 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 CCDC172P0C7W6 258 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 SP2Q02086 613 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 CCL15Q16663 113 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 NLRX1Q86UT6 975 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 CCT6BQ92526 530 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 HVCN1Q96D96 273 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 NAP1L3Q99457 506 aaPredicted RBP18.24■□□□□ 0.51
FOXA1-201ENST00000250448 ERP44Q9BS26 406 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 TACO1Q9BSH4 297 aaKnown RBP18.24■□□□□ 0.51
FOXA1-201ENST00000250448 PORCNQ9H237 461 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 DAAM1Q9Y4D1 1078 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 A0A0G2JMZ2 1700 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 CENPFP49454 3210 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 FAM187AA6NFU0 413 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 ATP2C2O75185 946 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 NUDT17P0C025 328 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 GHRP10912 638 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 ABCB4P21439 1286 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 OSBPP22059 807 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 KCNA1Q09470 495 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 BORCS6Q96GS4 357 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 MS4A4AQ96JQ5 239 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 IKZF4Q9H2S9 585 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 ERVK-5Q9HDB9 667 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 TBC1D22BQ9NU19 505 aa18.24■□□□□ 0.51
FOXA1-201ENST00000250448 BTBD19C9JJ37 291 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 SHBGP04278 402 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 COPB2P35606 906 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 ALDH5A1P51649 535 aaPredicted RBP18.23■□□□□ 0.51
FOXA1-201ENST00000250448 CST9Q5W186 159 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 ADAT2Q7Z6V5 191 aaKnown RBP18.23■□□□□ 0.51
FOXA1-201ENST00000250448 TAX1BP1Q86VP1 789 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 CCDC50Q8IVM0 306 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 FAM186BQ8IYM0 893 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 NEK9Q8TD19 979 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 BRI3BPQ8WY22 251 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 NACC1Q96RE7 527 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 STK33Q9BYT3 514 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 KDM4CQ9H3R0 1056 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 PDHXO00330 501 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 KCNA2P16389 499 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 XRCC4Q13426 336 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 DRAP1Q14919 205 aaPredicted RBP18.23■□□□□ 0.51
FOXA1-201ENST00000250448 ARHGEF26Q96DR7 871 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 SYT11Q9BT88 431 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 PRDM16Q9HAZ2 1276 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 MCM8Q9UJA3 840 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 STK24Q9Y6E0 443 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 ZMYM2Q9UBW7 1377 aa18.23■□□□□ 0.51
FOXA1-201ENST00000250448 TGFB1I1O43294 461 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 DNAJC8O75937 253 aaPredicted RBP18.22■□□□□ 0.51
FOXA1-201ENST00000250448 P4HBP07237 508 aaKnown RBP18.22■□□□□ 0.51
FOXA1-201ENST00000250448 PMS2P54278 862 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 DHX34Q14147 1143 aaKnown RBP18.22■□□□□ 0.51
FOXA1-201ENST00000250448 NEDD9Q14511 834 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 DENND2CQ68D51 928 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms