RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TCF25Q9BQ70 676 aa26.67■■□□□ 1.86
SDF2L1-201ENST00000248958 ENTPD7Q9NQZ7 604 aa26.67■■□□□ 1.86
SDF2L1-201ENST00000248958 TOPORSQ9NS56 1045 aaPredicted RBP26.67■■□□□ 1.86
SDF2L1-201ENST00000248958 KBTBD4Q9NVX7 518 aa26.67■■□□□ 1.86
SDF2L1-201ENST00000248958 GDAQ9Y2T3 454 aa26.67■■□□□ 1.86
SDF2L1-201ENST00000248958 ABLIM1O14639 778 aa26.66■■□□□ 1.86
SDF2L1-201ENST00000248958 CLDN3O15551 220 aa26.66■■□□□ 1.86
SDF2L1-201ENST00000248958 CSPG5O95196 566 aa26.66■■□□□ 1.86
SDF2L1-201ENST00000248958 PIGRP01833 764 aa26.66■■□□□ 1.86
SDF2L1-201ENST00000248958 THP07101 528 aa26.66■■□□□ 1.86
SDF2L1-201ENST00000248958 COL19A1Q14993 1142 aa26.66■■□□□ 1.86
SDF2L1-201ENST00000248958 ADALQ6DHV7 355 aa26.66■■□□□ 1.86
SDF2L1-201ENST00000248958 TMC7Q7Z402 723 aa26.66■■□□□ 1.86
SDF2L1-201ENST00000248958 CDCA3Q99618 268 aaPredicted RBP26.66■■□□□ 1.86
SDF2L1-201ENST00000248958 COLEC11Q9BWP8 271 aa26.66■■□□□ 1.86
SDF2L1-201ENST00000248958 UBE2ZQ9H832 354 aaPredicted RBP26.66■■□□□ 1.86
SDF2L1-201ENST00000248958 CITO14578 2027 aa26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 FRMD3A2A2Y4 597 aa26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 POLR2DO15514 142 aaKnown RBP26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 B4GALT3O60512 393 aa26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 OR1G1P47890 313 aa26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 LIG4P49917 911 aa26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 MCL1Q07820 350 aa26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 SMC1AQ14683 1233 aaKnown RBP26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 NOLC1Q14978 699 aaKnown RBP eCLIP26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 ZNF720Q7Z2F6 126 aa26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 ZBTB33Q86T24 672 aa26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 SFR1Q86XK3 245 aa26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 CCDC65Q8IXS2 484 aa26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 ACAP3Q96P50 834 aa26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 ASB2Q96Q27 587 aa26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 OLFML3Q9NRN5 406 aa26.65■■□□□ 1.86
SDF2L1-201ENST00000248958 IDEP14735 1019 aa26.64■■□□□ 1.86
SDF2L1-201ENST00000248958 NMT1P30419 496 aaKnown RBP26.64■■□□□ 1.86
SDF2L1-201ENST00000248958 HYAL1Q12794 435 aa26.64■■□□□ 1.86
SDF2L1-201ENST00000248958 TUSC3Q13454 348 aa26.64■■□□□ 1.86
SDF2L1-201ENST00000248958 KYAT1Q16773 422 aa26.64■■□□□ 1.86
SDF2L1-201ENST00000248958 TJAP1Q5JTD0 557 aa26.64■■□□□ 1.86
SDF2L1-201ENST00000248958 TMEM173Q86WV6 379 aaPredicted RBP26.64■■□□□ 1.86
SDF2L1-201ENST00000248958 MAP4K3Q8IVH8 894 aa26.64■■□□□ 1.86
SDF2L1-201ENST00000248958 ZBTB45Q96K62 511 aaPredicted RBP26.64■■□□□ 1.86
SDF2L1-201ENST00000248958 COL25A1Q9BXS0 654 aaPredicted RBP26.64■■□□□ 1.86
SDF2L1-201ENST00000248958 TLE6Q9H808 572 aa26.64■■□□□ 1.86
SDF2L1-201ENST00000248958 PANK4Q9NVE7 773 aa26.64■■□□□ 1.86
SDF2L1-201ENST00000248958 ANKFY1Q9P2R3 1169 aa26.64■■□□□ 1.86
SDF2L1-201ENST00000248958 PTGESO14684 152 aa26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 HNRNPDLO14979 420 aaKnown RBP26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 CMA1P23946 247 aa26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 MATR3P43243 847 aaKnown RBP eCLIP26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 ALCAMQ13740 583 aa26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 CTC1Q2NKJ3 1217 aa26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 HERC4Q5GLZ8 1057 aaPredicted RBP26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 PLPP4Q5VZY2 271 aa26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 CNNM4Q6P4Q7 775 aa26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 ADGRD2Q7Z7M1 963 aa26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 VPS52Q8N1B4 723 aa26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 ZBP1Q9H171 429 aa26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 MRPL44Q9H9J2 332 aaKnown RBP26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 KCNH3Q9ULD8 1083 aa26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 TRIP11Q15643 1979 aa26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 MYO7AQ13402 2215 aa26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 VCANP13611 3396 aa26.63■■□□□ 1.85
SDF2L1-201ENST00000248958 CTSAP10619 480 aa26.62■■□□□ 1.85
SDF2L1-201ENST00000248958 XKR4Q5GH76 650 aa26.62■■□□□ 1.85
SDF2L1-201ENST00000248958 EFHBQ8N7U6 833 aa26.62■■□□□ 1.85
SDF2L1-201ENST00000248958 CEP120Q8N960 986 aa26.62■■□□□ 1.85
SDF2L1-201ENST00000248958 TRIM9Q9C026 710 aa26.62■■□□□ 1.85
SDF2L1-201ENST00000248958 CLDND1Q9NY35 253 aa26.62■■□□□ 1.85
SDF2L1-201ENST00000248958 EXOC7Q9UPT5 735 aa26.62■■□□□ 1.85
SDF2L1-201ENST00000248958 IRAK3Q9Y616 596 aa26.62■■□□□ 1.85
SDF2L1-201ENST00000248958 NRIP1P48552 1158 aa26.61■■□□□ 1.85
SDF2L1-201ENST00000248958 OSTNP61366 133 aa26.61■■□□□ 1.85
SDF2L1-201ENST00000248958 CEP57L1Q8IYX8 460 aa26.61■■□□□ 1.85
SDF2L1-201ENST00000248958 MRPL43Q8N983 215 aaKnown RBP26.61■■□□□ 1.85
SDF2L1-201ENST00000248958 BCL7CQ8WUZ0 217 aaPredicted RBP26.61■■□□□ 1.85
SDF2L1-201ENST00000248958 C7orf25Q9BPX7 421 aa26.61■■□□□ 1.85
SDF2L1-201ENST00000248958 IGFLR1Q9H665 355 aa26.61■■□□□ 1.85
SDF2L1-201ENST00000248958 MARCH5Q9NX47 278 aa26.61■■□□□ 1.85
SDF2L1-201ENST00000248958 USP25Q9UHP3 1055 aa26.61■■□□□ 1.85
SDF2L1-201ENST00000248958 SSX2IPQ9Y2D8 614 aa26.61■■□□□ 1.85
SDF2L1-201ENST00000248958 PRG3Q9Y2Y8 225 aaPredicted RBP26.61■■□□□ 1.85
SDF2L1-201ENST00000248958 PCDHB13Q9Y5F0 798 aa26.61■■□□□ 1.85
SDF2L1-201ENST00000248958 PPP1R37O75864 691 aa26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 CXCL14O95715 111 aa26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 HARSP12081 509 aaKnown RBP26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 TFF2Q03403 129 aa26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 ADAM15Q13444 863 aa26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 DUSP6Q16828 381 aa26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 PUS10Q3MIT2 529 aaKnown RBP26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 LEXMQ3ZCV2 418 aa26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 ZC2HC1CQ53FD0 456 aaPredicted RBP26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 SLFN12LQ6IEE8 588 aa26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 ALKAL1Q6UXT8 129 aa26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 STAMQ92783 540 aa26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 STRA6Q9BX79 667 aa26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 SLC38A7Q9NVC3 462 aa26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 PCDHGC5Q9Y5F6 944 aa26.6■■□□□ 1.85
SDF2L1-201ENST00000248958 GCNT3O95395 438 aa26.59■■□□□ 1.85
SDF2L1-201ENST00000248958 SOD2P04179 222 aa26.59■■□□□ 1.85
SDF2L1-201ENST00000248958 SRGAP2BP0DMP2 458 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms