RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 PYGMP11217 842 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 DGKZQ13574 1117 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 ANO5Q75V66 913 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 HOOK3Q86VS8 718 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 NIM1KQ8IY84 436 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 GPATCH11Q8N954 259 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 ZNF653Q96CK0 615 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 NT5C1BQ96P26 610 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 PNMA2Q9UL42 364 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 PCDHA3Q9Y5H8 950 aa23.24■■□□□ 1.31
SH2D3A-201ENST00000245908 DENND3A2RUS2 1198 aa23.23■■□□□ 1.31
SH2D3A-201ENST00000245908 GMNCA6NCL1 334 aa23.23■■□□□ 1.31
SH2D3A-201ENST00000245908 GTF2H1P32780 548 aa23.23■■□□□ 1.31
SH2D3A-201ENST00000245908 PDE6CP51160 858 aa23.23■■□□□ 1.31
SH2D3A-201ENST00000245908 RNF207Q6ZRF8 634 aa23.23■■□□□ 1.31
SH2D3A-201ENST00000245908 TRMT1LQ7Z2T5 733 aaKnown RBP23.23■■□□□ 1.31
SH2D3A-201ENST00000245908 FBXL13Q8NEE6 735 aa23.23■■□□□ 1.31
SH2D3A-201ENST00000245908 SPIRE2Q8WWL2 714 aa23.23■■□□□ 1.31
SH2D3A-201ENST00000245908 KIFC3Q9BVG8 833 aa23.23■■□□□ 1.31
SH2D3A-201ENST00000245908 PARP2Q9UGN5 583 aa23.23■■□□□ 1.31
SH2D3A-201ENST00000245908 ARID2Q68CP9 1835 aa23.23■■□□□ 1.31
SH2D3A-201ENST00000245908 TMOD1P28289 359 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 RPL21P46778 160 aaKnown RBP23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 SLC39A4Q6P5W5 647 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 CCDC137Q6PK04 289 aaKnown RBP23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 SLC13A5Q86YT5 568 aaPredicted RBP23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 DDX1Q92499 740 aaKnown RBP23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 RUNDC3BQ96NL0 473 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 NTPCRQ9BSD7 190 aaKnown RBP23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 KMT5AQ9NQR1 393 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 GINM1Q9NU53 330 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 RAB20Q9NX57 234 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 SPOPO43791 374 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 ARHGEF16Q5VV41 709 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 TAS1R2Q8TE23 839 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 BSNDQ8WZ55 320 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 KIFAP3Q92845 792 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 CYFIP2Q96F07 1278 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 TEPSINQ96N21 525 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 POP1Q99575 1024 aaKnown RBP23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 SENP7Q9BQF6 1050 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 MOV10L1Q9BXT6 1211 aaKnown RBP23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 MTUS1Q9ULD2 1270 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 PARP14Q460N5 1801 aa23.22■■□□□ 1.31
SH2D3A-201ENST00000245908 TESPA1A2RU30 521 aaPredicted RBP23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 CYP24A1Q07973 514 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 SIX1Q15475 284 aaPredicted RBP23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 XRRA1Q6P2D8 792 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 CPNE8Q86YQ8 564 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 OTUD6BQ8N6M0 293 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 RNF25Q96BH1 459 aaPredicted RBP23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 BTBD6Q96KE9 485 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 CXorf56Q9H5V9 222 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 CNOT10Q9H9A5 744 aaKnown RBP23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 C17orf75Q9HAS0 396 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 MYOZ2Q9NPC6 264 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 TOPORSQ9NS56 1045 aaPredicted RBP23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 STK32BQ9NY57 414 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 CTDP1Q9Y5B0 961 aaPredicted RBP23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 ZBED4O75132 1171 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 SHBGP04278 402 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 HNRNPH1P31943 449 aaKnown RBP23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 COILP38432 576 aaPredicted RBP23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 ENPEPQ07075 957 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 CXCL9Q07325 125 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 DENND2CQ68D51 928 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 ZNF772Q68DY9 489 aaPredicted RBP23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 USP37Q86T82 979 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 RPAINQ86UA6 219 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 C12orf50Q8NA57 414 aaPredicted RBP23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 PCDHA10Q9Y5I2 948 aa23.21■■□□□ 1.31
SH2D3A-201ENST00000245908 CAND2O75155 1236 aa23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 ACAD10Q6JQN1 1059 aa23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 MTRF1LQ9UGC7 380 aaKnown RBP23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 SCAF8Q9UPN6 1271 aaKnown RBP23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 TCRBV7S2A1N4TA0A589 114 aa23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 GRIN3BO60391 1043 aa23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 KCNA3P22001 575 aa23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 FNTAP49354 379 aa23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 BYSLQ13895 437 aaKnown RBP23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 C6orf89Q6UWU4 347 aa23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 NSMFQ6X4W1 530 aa23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 OTUD6AQ7L8S5 288 aa23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 RAPGEF5Q92565 580 aa23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 PGM2Q96G03 612 aa23.2■■□□□ 1.3
SH2D3A-201ENST00000245908 CTNND1O60716 968 aaKnown RBP23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 FDX1P10109 184 aa23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 RWDD2BP57060 319 aa23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 SV2AQ7L0J3 742 aa23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 CNPY4Q8N129 248 aa23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 POMGNT1Q8WZA1 660 aa23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 GPRASP2Q96D09 838 aa23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 RPAP3Q9H6T3 665 aaPredicted RBP23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 CNOT7Q9UIV1 285 aaKnown RBP23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 C5orf60A6NFR6 353 aa23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 RARAP10276 462 aa23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 CCND2P30279 289 aa23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 MAP2K2P36507 400 aa23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 CLEC16AQ2KHT3 1053 aa23.19■■□□□ 1.3
SH2D3A-201ENST00000245908 KCNV1Q6PIU1 500 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms