RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 RRAGDQ9NQL2 400 aaPredicted RBP20.18■□□□□ 0.82
SNX17-201ENST00000233575 LRRC53A6NM62 1247 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 OGTO15294 1046 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 STX10O60499 249 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 ERLIN2O94905 339 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 DARSP14868 501 aaKnown RBP20.17■□□□□ 0.82
SNX17-201ENST00000233575 MXI1P50539 228 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 PSMD6Q15008 389 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 MTFR1Q15390 333 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 RRAGAQ7L523 313 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 LMO3Q8TAP4 145 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 VTI1AQ96AJ9 217 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 CHP1Q99653 195 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 PLCB1Q9NQ66 1216 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 CEP72Q9P209 647 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 FHOD1Q9Y613 1164 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 UCHL3P15374 230 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 FECHP22830 423 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 ITGA7Q13683 1181 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 SNX17Q15036 470 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 EPC2Q52LR7 807 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 TAF2Q6P1X5 1199 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 CACNA2D4Q7Z3S7 1137 aa20.17■□□□□ 0.82
SNX17-201ENST00000233575 INTS2Q9H0H0 1204 aaKnown RBP20.17■□□□□ 0.82
SNX17-201ENST00000233575 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.17■□□□□ 0.823e-7■■■■■ 153.3
SNX17-201ENST00000233575 CPSF3Q9UKF6 684 aaKnown RBP20.17■□□□□ 0.82
SNX17-201ENST00000233575 EIF4BP23588 611 aaKnown RBP20.16■□□□□ 0.82
SNX17-201ENST00000233575 CDC42EP1Q00587 391 aa20.16■□□□□ 0.82
SNX17-201ENST00000233575 RAD9BQ6WBX8 426 aa20.16■□□□□ 0.82
SNX17-201ENST00000233575 SERINC5Q86VE9 423 aa20.16■□□□□ 0.82
SNX17-201ENST00000233575 SESTD1Q86VW0 696 aa20.16■□□□□ 0.82
SNX17-201ENST00000233575 ELMO3Q96BJ8 720 aa20.16■□□□□ 0.82
SNX17-201ENST00000233575 USP27XA6NNY8 438 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 HOXA11P31270 313 aaPredicted RBP20.15■□□□□ 0.82
SNX17-201ENST00000233575 CLDN10P78369 228 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 PDXDC1Q6P996 788 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 SV2AQ7L0J3 742 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 CATSPER4Q7RTX7 472 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 BRSK2Q8IWQ3 736 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 ZNF397Q8NF99 534 aaPredicted RBP20.15■□□□□ 0.82
SNX17-201ENST00000233575 SEMA4DQ92854 862 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 IQCDQ96DY2 449 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 TMEM8AQ9HCN3 771 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 TRMT13Q9NUP7 481 aaKnown RBP20.15■□□□□ 0.82
SNX17-201ENST00000233575 A0A1B0GUA9 196 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 NRDCO43847 1150 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 TNNI1P19237 187 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 KRT39Q6A163 491 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 NME8Q8N427 588 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 EHBP1Q8NDI1 1231 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 TAS1R2Q8TE23 839 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 FNBP1Q96RU3 617 aa20.15■□□□□ 0.82
SNX17-201ENST00000233575 ANK1P16157 1881 aa20.14■□□□□ 0.82
SNX17-201ENST00000233575 MEFVO15553 781 aaPredicted RBP20.14■□□□□ 0.81
SNX17-201ENST00000233575 ARHGAP6O43182 974 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 N4BP1O75113 896 aaKnown RBP20.14■□□□□ 0.81
SNX17-201ENST00000233575 CTSHP09668 335 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 ENOX2Q16206 610 aaKnown RBP20.14■□□□□ 0.81
SNX17-201ENST00000233575 MEA1Q16626 185 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 PTGISQ16647 500 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 SLC9C1Q4G0N8 1177 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 SCARA3Q6AZY7 606 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 IQCEQ6IPM2 695 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 TOGARAM2Q6ZUX3 1019 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 FAM212AQ96EL1 285 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 EDEM3Q9BZQ6 932 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 A0A1W2PQ45 241 aaPredicted RBP20.14■□□□□ 0.81
SNX17-201ENST00000233575 A0A1W2PQY0 241 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 MOXD2PA6NHM9 499 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 P4HA2O15460 535 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 CRYBB1P53674 252 aaPredicted RBP20.14■□□□□ 0.81
SNX17-201ENST00000233575 MRPS6P82932 125 aaKnown RBP20.14■□□□□ 0.81
SNX17-201ENST00000233575 ENPEPQ07075 957 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 PHLDB3Q6NSJ2 640 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 C15orf39Q6ZRI6 1047 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 USP37Q86T82 979 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 OR5B17Q8NGF7 314 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 GLT1D1Q96MS3 346 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 DESI2Q9BSY9 194 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 NAA15Q9BXJ9 866 aaKnown RBP20.14■□□□□ 0.81
SNX17-201ENST00000233575 CELF4Q9BZC1 486 aaKnown RBP20.14■□□□□ 0.81
SNX17-201ENST00000233575 PLAGL2Q9UPG8 496 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 CDY2AQ9Y6F7 541 aa20.14■□□□□ 0.81
SNX17-201ENST00000233575 PMM2O15305 246 aa20.13■□□□□ 0.81
SNX17-201ENST00000233575 CABYRO75952 493 aa20.13■□□□□ 0.81
SNX17-201ENST00000233575 PLEKP08567 350 aaPredicted RBP20.13■□□□□ 0.81
SNX17-201ENST00000233575 PNMA6AP0CW24 399 aaPredicted RBP20.13■□□□□ 0.81
SNX17-201ENST00000233575 CXCL8P10145 99 aa20.13■□□□□ 0.81
SNX17-201ENST00000233575 MCF2P10911 925 aa20.13■□□□□ 0.81
SNX17-201ENST00000233575 GTF2H1P32780 548 aa20.13■□□□□ 0.81
SNX17-201ENST00000233575 TDRD10Q5VZ19 366 aaKnown RBP20.13■□□□□ 0.81
SNX17-201ENST00000233575 TRMT1Q9NXH9 659 aaKnown RBP20.13■□□□□ 0.81
SNX17-201ENST00000233575 ZNF500O60304 480 aaPredicted RBP20.12■□□□□ 0.81
SNX17-201ENST00000233575 CHRNA1P02708 482 aa20.12■□□□□ 0.81
SNX17-201ENST00000233575 C4BPAP04003 597 aaKnown RBP20.12■□□□□ 0.81
SNX17-201ENST00000233575 STAG3L1P0CL83 205 aa20.12■□□□□ 0.81
SNX17-201ENST00000233575 RAPGEF1Q13905 1077 aa20.12■□□□□ 0.81
SNX17-201ENST00000233575 CYP26C1Q6V0L0 522 aa20.12■□□□□ 0.81
SNX17-201ENST00000233575 ARHGEF19Q8IW93 802 aa20.12■□□□□ 0.81
SNX17-201ENST00000233575 DEFB118Q96PH6 123 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms