RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 PITPNM3Q9BZ71 974 aa15.08■□□□□ 0
SF1-201ENST00000227503 SIX2Q9NPC8 291 aa15.08■□□□□ 0
SF1-201ENST00000227503 PCDHB13Q9Y5F0 798 aa15.08■□□□□ 0
SF1-201ENST00000227503 POLRMTO00411 1230 aaKnown RBP15.07■□□□□ 0
SF1-201ENST00000227503 MEIS1O00470 390 aa15.07■□□□□ 0
SF1-201ENST00000227503 AKAP3O75969 853 aa15.07■□□□□ 0
SF1-201ENST00000227503 ARHGAP4P98171 946 aa15.07■□□□□ 0
SF1-201ENST00000227503 KNOP1Q1ED39 458 aaKnown RBP15.07■□□□□ 0
SF1-201ENST00000227503 KHDC1Q4VXA5 237 aaKnown RBP15.07■□□□□ 0
SF1-201ENST00000227503 TNFAIP8L3Q5GJ75 292 aa15.07■□□□□ 0
SF1-201ENST00000227503 C10orf76Q5T2E6 689 aa15.07■□□□□ 0
SF1-201ENST00000227503 MTHFD1LQ6UB35 978 aa15.07■□□□□ 0
SF1-201ENST00000227503 HHIPL2Q6UWX4 724 aa15.07■□□□□ 0
SF1-201ENST00000227503 ZC3H18Q86VM9 953 aaKnown RBP15.07■□□□□ 0
SF1-201ENST00000227503 SYT2Q8N9I0 419 aaPredicted RBP15.07■□□□□ 0
SF1-201ENST00000227503 OLIG1Q8TAK6 271 aa15.07■□□□□ 0
SF1-201ENST00000227503 KIFAP3Q92845 792 aa15.07■□□□□ 0
SF1-201ENST00000227503 CCDC17Q96LX7 622 aa15.07■□□□□ 0
SF1-201ENST00000227503 RAB3IPQ96QF0 476 aaPredicted RBP15.07■□□□□ 0
SF1-201ENST00000227503 REEP2Q9BRK0 252 aa15.07■□□□□ 0
SF1-201ENST00000227503 RASAL2Q9UJF2 1139 aa15.07■□□□□ 0
SF1-201ENST00000227503 USP21Q9UK80 565 aa15.07■□□□□ 0
SF1-201ENST00000227503 LRRN2O75325 713 aa15.07■□□□□ 0
SF1-201ENST00000227503 NPTXRO95502 500 aa15.07■□□□□ 0
SF1-201ENST00000227503 EEF2P13639 858 aaKnown RBP15.07■□□□□ 0
SF1-201ENST00000227503 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 03e-10■■■■■ 38.5
SF1-201ENST00000227503 AP3B2Q13367 1082 aa15.07■□□□□ 0
SF1-201ENST00000227503 RRP1BQ14684 758 aaKnown RBP15.07■□□□□ 0
SF1-201ENST00000227503 CERKLQ49MI3 558 aaPredicted RBP15.07■□□□□ 0
SF1-201ENST00000227503 Q4G0T1 1027 aa15.07■□□□□ 0
SF1-201ENST00000227503 PRR16Q569H4 304 aa15.07■□□□□ 0
SF1-201ENST00000227503 OR52E8Q6IFG1 317 aa15.07■□□□□ 0
SF1-201ENST00000227503 ZNF746Q6NUN9 644 aaPredicted RBP15.07■□□□□ 0
SF1-201ENST00000227503 SFR1Q86XK3 245 aa15.07■□□□□ 0
SF1-201ENST00000227503 DCAF4Q8WV16 495 aa15.07■□□□□ 0
SF1-201ENST00000227503 MRRFQ96E11 262 aaKnown RBP15.07■□□□□ 0
SF1-201ENST00000227503 AAASQ9NRG9 546 aa15.07■□□□□ 0
SF1-201ENST00000227503 RGL1Q9NZL6 768 aa15.07■□□□□ 0
SF1-201ENST00000227503 PHF2O75151 1096 aa15.07■□□□□ 0
SF1-201ENST00000227503 TAC1P20366 129 aa15.07■□□□□ 0
SF1-201ENST00000227503 RPA1P27694 616 aa15.07■□□□□ 0
SF1-201ENST00000227503 PDCD2Q16342 344 aaPredicted RBP15.07■□□□□ 0
SF1-201ENST00000227503 ARHGAP44Q17R89 818 aa15.07■□□□□ 0
SF1-201ENST00000227503 SLFN13Q68D06 897 aa15.07■□□□□ 0
SF1-201ENST00000227503 SIAH1Q8IUQ4 282 aa15.07■□□□□ 0
SF1-201ENST00000227503 CTNNBL1Q8WYA6 563 aaPredicted RBP15.07■□□□□ 0
SF1-201ENST00000227503 NENFQ9UMX5 172 aa15.07■□□□□ 0
SF1-201ENST00000227503 PCDHA3Q9Y5H8 950 aa15.07■□□□□ 0
SF1-201ENST00000227503 FAM187AA6NFU0 413 aa15.06■□□□□ 0
SF1-201ENST00000227503 UBTFL6P0CB48 400 aaPredicted RBP15.06■□□□□ 0
SF1-201ENST00000227503 T-ENOLP0DO92 83 aa15.06■□□□□ 0
SF1-201ENST00000227503 CHRNB2P17787 502 aa15.06■□□□□ 0
SF1-201ENST00000227503 SCNN1BP51168 640 aa15.06■□□□□ 0
SF1-201ENST00000227503 PPATQ06203 517 aa15.06■□□□□ 0
SF1-201ENST00000227503 DOK7Q18PE1 504 aa15.06■□□□□ 0
SF1-201ENST00000227503 VPS36Q86VN1 386 aa15.06■□□□□ 0
SF1-201ENST00000227503 NRG4Q8WWG1 115 aa15.06■□□□□ 0
SF1-201ENST00000227503 SLC7A6OSQ96CW6 309 aaPredicted RBP15.06■□□□□ 0
SF1-201ENST00000227503 FGD4Q96M96 766 aa15.06■□□□□ 0
SF1-201ENST00000227503 ZC3H12CQ9C0D7 883 aaKnown RBP15.06■□□□□ 0
SF1-201ENST00000227503 CNOT7Q9UIV1 285 aaKnown RBP15.06■□□□□ 0
SF1-201ENST00000227503 DNM3Q9UQ16 869 aa15.06■□□□□ 0
SF1-201ENST00000227503 ALG6Q9Y672 507 aa15.06■□□□□ 0
SF1-201ENST00000227503 NUMBLQ9Y6R0 609 aa15.06■□□□□ 0
SF1-201ENST00000227503 FAM196BA6NMK8 535 aa15.06■□□□□ 0
SF1-201ENST00000227503 FAM86B1E9PN63 330 aa15.06■□□□□ 0
SF1-201ENST00000227503 O00370 1275 aa15.06■□□□□ 0
SF1-201ENST00000227503 PDXKO00764 312 aa15.06■□□□□ 0
SF1-201ENST00000227503 TBX3O15119 743 aa15.06■□□□□ 0
SF1-201ENST00000227503 RAD21O60216 631 aa15.06■□□□□ 0
SF1-201ENST00000227503 FAM86B2P0C5J1 330 aa15.06■□□□□ 0
SF1-201ENST00000227503 XRCC5P13010 732 aaKnown RBP15.06■□□□□ 0
SF1-201ENST00000227503 RARGP13631 454 aa15.06■□□□□ 0
SF1-201ENST00000227503 ETS2P15036 469 aa15.06■□□□□ 0
SF1-201ENST00000227503 SERPINB4P48594 390 aa15.06■□□□□ 0
SF1-201ENST00000227503 EPHA7Q15375 998 aa15.06■□□□□ 0
SF1-201ENST00000227503 ARHGAP22Q7Z5H3 698 aa15.06■□□□□ 0
SF1-201ENST00000227503 C1orf54Q8WWF1 131 aa15.06■□□□□ 0
SF1-201ENST00000227503 RFFLQ8WZ73 363 aa15.06■□□□□ 0
SF1-201ENST00000227503 TEKT1Q969V4 418 aa15.06■□□□□ 0
SF1-201ENST00000227503 NYAP2Q9P242 653 aa15.06■□□□□ 0
SF1-201ENST00000227503 BZW2Q9Y6E2 419 aaKnown RBP15.06■□□□□ 0
SF1-201ENST00000227503 ATP9AO75110 1047 aa15.05■□□□□ 0
SF1-201ENST00000227503 KRT36O76013 467 aa15.05■□□□□ 0
SF1-201ENST00000227503 ZCCHC18P0CG32 403 aa15.05■□□□□ 0
SF1-201ENST00000227503 DLATP10515 647 aaKnown RBP15.05■□□□□ 0
SF1-201ENST00000227503 PRKCIP41743 596 aa15.05■□□□□ 0
SF1-201ENST00000227503 DHX34Q14147 1143 aaKnown RBP15.05■□□□□ 0
SF1-201ENST00000227503 MESDQ14696 234 aa15.05■□□□□ 0
SF1-201ENST00000227503 MTFR1Q15390 333 aa15.05■□□□□ 0
SF1-201ENST00000227503 CCDC6Q16204 474 aa15.05■□□□□ 0
SF1-201ENST00000227503 BMT2Q1RMZ1 405 aa15.05■□□□□ 0
SF1-201ENST00000227503 TSNAXIP1Q2TAA8 658 aa15.05■□□□□ 0
SF1-201ENST00000227503 SPDYCQ5MJ68 293 aa15.05■□□□□ 0
SF1-201ENST00000227503 DSTYKQ6XUX3 929 aa15.05■□□□□ 0
SF1-201ENST00000227503 FAM118BQ9BPY3 351 aa15.05■□□□□ 0
SF1-201ENST00000227503 CARD9Q9H257 536 aa15.05■□□□□ 0
SF1-201ENST00000227503 LRMDAQ9H2I8 198 aa15.05■□□□□ 0
SF1-201ENST00000227503 TXLNGQ9NUQ3 528 aa15.05■□□□□ 0
SF1-201ENST00000227503 UTRNP46939 3433 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms