RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 GZMAP12544 262 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 RARGP13631 454 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 ITGB5P18084 799 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 MAP2K1Q02750 393 aaPredicted RBP18.53■□□□□ 0.56
USB1-201ENST00000219281 SIX1Q15475 284 aaPredicted RBP18.53■□□□□ 0.56
USB1-201ENST00000219281 CYP1B1Q16678 543 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 FAM83AQ86UY5 434 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 CHURC1Q8WUH1 139 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 ZNF653Q96CK0 615 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 POP1Q99575 1024 aaKnown RBP18.53■□□□□ 0.56
USB1-201ENST00000219281 NCAPGQ9BPX3 1015 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 MTFR1LQ9H019 292 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 TAOK3Q9H2K8 898 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 A1CFQ9NQ94 594 aaKnown RBP18.53■□□□□ 0.56
USB1-201ENST00000219281 ASAP2O43150 1006 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 PLS3P13797 630 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 CAP2P40123 477 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 IRX3P78415 501 aaPredicted RBP18.53■□□□□ 0.56
USB1-201ENST00000219281 FMO1Q01740 532 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 MKRN4PQ13434 485 aaPredicted RBP18.53■□□□□ 0.56
USB1-201ENST00000219281 AUHQ13825 339 aaKnown RBP18.53■□□□□ 0.56
USB1-201ENST00000219281 CCDC38Q502W7 563 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 NSMFQ6X4W1 530 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 RNF207Q6ZRF8 634 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 PIGWQ7Z7B1 504 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 TEX2Q8IWB9 1127 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 ANKS4BQ8N8V4 417 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 TMEM109Q9BVC6 243 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 PIM2Q9P1W9 311 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 ZHX2Q9Y6X8 837 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 PASKQ96RG2 1323 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 CYP1A2P05177 515 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 P4HBP07237 508 aaKnown RBP18.52■□□□□ 0.56
USB1-201ENST00000219281 RDXP35241 583 aaKnown RBP18.52■□□□□ 0.56
USB1-201ENST00000219281 IFNAR2P48551 515 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 MAP3K10Q02779 954 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 ALCAMQ13740 583 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 SNCBQ16143 134 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 TRMT1LQ7Z2T5 733 aaKnown RBP18.52■□□□□ 0.56
USB1-201ENST00000219281 HAUS6Q7Z4H7 955 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 CROCCP2Q86T23 111 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 LDHDQ86WU2 507 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 C12orf56Q8IXR9 622 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 SEMA4DQ92854 862 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 SGSM3Q96HU1 749 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 ELAC2Q9BQ52 826 aaKnown RBP18.52■□□□□ 0.56
USB1-201ENST00000219281 KCNH7Q9NS40 1196 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 FBXO28Q9NVF7 368 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 MYH11P35749 1972 aa18.52■□□□□ 0.56
USB1-201ENST00000219281 ADRB2P07550 413 aa18.52■□□□□ 0.55
USB1-201ENST00000219281 VIMP08670 466 aaKnown RBP18.52■□□□□ 0.55
USB1-201ENST00000219281 MAPTP10636 758 aaKnown RBP18.52■□□□□ 0.55
USB1-201ENST00000219281 GSCP56915 257 aaPredicted RBP18.52■□□□□ 0.55
USB1-201ENST00000219281 XRCC4Q13426 336 aa18.52■□□□□ 0.55
USB1-201ENST00000219281 CYFIP1Q7L576 1253 aa18.52■□□□□ 0.55
USB1-201ENST00000219281 TMEM150BA6NC51 233 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 SLC16A4O15374 487 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 DNAJC8O75937 253 aaPredicted RBP18.51■□□□□ 0.55
USB1-201ENST00000219281 ZBTB7AO95365 584 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 EGFRP00533 1210 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 DLATP10515 647 aaKnown RBP18.51■□□□□ 0.55
USB1-201ENST00000219281 RARRES1P49788 294 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 MFAP3P55082 362 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 RWDD2BP57060 319 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 PPP1R7Q15435 360 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 RUNDC3BQ96NL0 473 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 SAMD15Q9P1V8 674 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 CLDN3O15551 220 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 ECEL1O95672 775 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 CYP11B1P15538 503 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 CALCOCO2Q13137 446 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 ITIH4Q14624 930 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 CNGA2Q16280 664 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 TNFAIP8L3Q5GJ75 292 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 FAM228AQ86W67 206 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 GPATCH11Q8N954 259 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 TMEM174Q8WUU8 243 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 C1orf54Q8WWF1 131 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 ELMO3Q96BJ8 720 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 STMN4Q9H169 189 aaPredicted RBP18.51■□□□□ 0.55
USB1-201ENST00000219281 GPRC5CQ9NQ84 441 aa18.51■□□□□ 0.55
USB1-201ENST00000219281 DHX15O43143 795 aaKnown RBP18.5■□□□□ 0.55
USB1-201ENST00000219281 MAP2K2P36507 400 aa18.5■□□□□ 0.55
USB1-201ENST00000219281 PEX3P56589 373 aa18.5■□□□□ 0.55
USB1-201ENST00000219281 TGFB2P61812 414 aa18.5■□□□□ 0.55
USB1-201ENST00000219281 GTF2BQ00403 316 aa18.5■□□□□ 0.55
USB1-201ENST00000219281 SNX1Q13596 522 aa18.5■□□□□ 0.55
USB1-201ENST00000219281 LONRF1Q17RB8 773 aa18.5■□□□□ 0.55
USB1-201ENST00000219281 CBWD2Q8IUF1 395 aa18.5■□□□□ 0.55
USB1-201ENST00000219281 SHC3Q92529 594 aa18.5■□□□□ 0.55
USB1-201ENST00000219281 CCDC127Q96BQ5 260 aa18.5■□□□□ 0.55
USB1-201ENST00000219281 MYCBPQ99417 103 aaPredicted RBP18.5■□□□□ 0.55
USB1-201ENST00000219281 DDX23Q9BUQ8 820 aaKnown RBP18.5■□□□□ 0.55
USB1-201ENST00000219281 MYOZ2Q9NPC6 264 aa18.5■□□□□ 0.55
USB1-201ENST00000219281 GTF3C4Q9UKN8 822 aa18.5■□□□□ 0.55
USB1-201ENST00000219281 TPX2Q9ULW0 747 aaKnown RBP18.5■□□□□ 0.55
USB1-201ENST00000219281 CIAPIN1Q6FI81 312 aa18.49■□□□□ 0.55
USB1-201ENST00000219281 TAOK1Q7L7X3 1001 aa18.49■□□□□ 0.55
USB1-201ENST00000219281 TAX1BP1Q86VP1 789 aa18.49■□□□□ 0.55
USB1-201ENST00000219281 C12orf50Q8NA57 414 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms