RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 CDC25BP30305 580 aa18.03■□□□□ 0.48
POLR2E-201ENST00000215587 HOXA11P31270 313 aaPredicted RBP18.03■□□□□ 0.48
POLR2E-201ENST00000215587 ACOT2P49753 483 aa18.03■□□□□ 0.48
POLR2E-201ENST00000215587 VAMP7P51809 220 aa18.03■□□□□ 0.48
POLR2E-201ENST00000215587 ENPEPQ07075 957 aa18.03■□□□□ 0.48
POLR2E-201ENST00000215587 CYP24A1Q07973 514 aa18.03■□□□□ 0.48
POLR2E-201ENST00000215587 LPIN1Q14693 890 aa18.03■□□□□ 0.48
POLR2E-201ENST00000215587 MIIPQ5JXC2 388 aa18.03■□□□□ 0.48
POLR2E-201ENST00000215587 LRRC8DQ7L1W4 858 aa18.03■□□□□ 0.48
POLR2E-201ENST00000215587 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.03■□□□□ 0.48
POLR2E-201ENST00000215587 DRC7Q8IY82 874 aa18.03■□□□□ 0.48
POLR2E-201ENST00000215587 THNSL1Q8IYQ7 743 aa18.03■□□□□ 0.48
POLR2E-201ENST00000215587 TMC2Q8TDI7 906 aa18.03■□□□□ 0.48
POLR2E-201ENST00000215587 RBAKQ9NYW8 714 aaPredicted RBP18.03■□□□□ 0.48
POLR2E-201ENST00000215587 ST3GAL5Q9UNP4 418 aa18.03■□□□□ 0.48
POLR2E-201ENST00000215587 TULP1O00294 542 aaPredicted RBP18.02■□□□□ 0.48
POLR2E-201ENST00000215587 AFPP02771 609 aaKnown RBP18.02■□□□□ 0.48
POLR2E-201ENST00000215587 CLTAP09496 248 aa18.02■□□□□ 0.48
POLR2E-201ENST00000215587 CD52P31358 61 aa18.02■□□□□ 0.48
POLR2E-201ENST00000215587 UBXN1Q04323 297 aa18.02■□□□□ 0.48
POLR2E-201ENST00000215587 NFX1Q12986 1120 aaKnown RBP18.02■□□□□ 0.48
POLR2E-201ENST00000215587 NR1I3Q14994 352 aa18.02■□□□□ 0.48
POLR2E-201ENST00000215587 SLC35C1Q96A29 364 aa18.02■□□□□ 0.48
POLR2E-201ENST00000215587 MFSD14AQ96MC6 490 aa18.02■□□□□ 0.48
POLR2E-201ENST00000215587 HTATIP2Q9BUP3 242 aa18.02■□□□□ 0.48
POLR2E-201ENST00000215587 TRIM6Q9C030 488 aaPredicted RBP18.02■□□□□ 0.48
POLR2E-201ENST00000215587 HIPK3Q9H422 1215 aa18.02■□□□□ 0.48
POLR2E-201ENST00000215587 ERVK-5Q9HDB9 667 aa18.02■□□□□ 0.48
POLR2E-201ENST00000215587 CHST12Q9NRB3 414 aa18.02■□□□□ 0.48
POLR2E-201ENST00000215587 INTS13Q9NVM9 706 aa18.02■□□□□ 0.48
POLR2E-201ENST00000215587 PADI3Q9ULW8 664 aa18.02■□□□□ 0.48
POLR2E-201ENST00000215587 NR2E3Q9Y5X4 410 aa18.02■□□□□ 0.48
POLR2E-201ENST00000215587 FAM189A1O60320 539 aa18.01■□□□□ 0.47
POLR2E-201ENST00000215587 KCNH2Q12809 1159 aa18.01■□□□□ 0.47
POLR2E-201ENST00000215587 PSMD6Q15008 389 aa18.01■□□□□ 0.47
POLR2E-201ENST00000215587 SURF1Q15526 300 aa18.01■□□□□ 0.47
POLR2E-201ENST00000215587 SEZ6Q53EL9 994 aa18.01■□□□□ 0.47
POLR2E-201ENST00000215587 ZBTB41Q5SVQ8 909 aa18.01■□□□□ 0.47
POLR2E-201ENST00000215587 TWF2Q6IBS0 349 aaKnown RBP18.01■□□□□ 0.47
POLR2E-201ENST00000215587 TRAF7Q6Q0C0 670 aa18.01■□□□□ 0.47
POLR2E-201ENST00000215587 CRELD2Q6UXH1 353 aaPredicted RBP18.01■□□□□ 0.47
POLR2E-201ENST00000215587 BRSK2Q8IWQ3 736 aa18.01■□□□□ 0.47
POLR2E-201ENST00000215587 FNBP1Q96RU3 617 aa18.01■□□□□ 0.47
POLR2E-201ENST00000215587 CCDC94Q9BW85 323 aaPredicted RBP18.01■□□□□ 0.47
POLR2E-201ENST00000215587 RPF1Q9H9Y2 349 aaKnown RBP18.01■□□□□ 0.47
POLR2E-201ENST00000215587 CPSF3Q9UKF6 684 aaKnown RBP18.01■□□□□ 0.47
POLR2E-201ENST00000215587 TEX33O43247 280 aa18■□□□□ 0.47
POLR2E-201ENST00000215587 N4BP1O75113 896 aaKnown RBP18■□□□□ 0.47
POLR2E-201ENST00000215587 IL18RAPO95256 599 aa18■□□□□ 0.47
POLR2E-201ENST00000215587 TRIM49P0CI25 452 aa18■□□□□ 0.47
POLR2E-201ENST00000215587 TRIM49CP0CI26 452 aa18■□□□□ 0.47
POLR2E-201ENST00000215587 STAG3L1P0CL83 205 aa18■□□□□ 0.47
POLR2E-201ENST00000215587 ZSCAN20P17040 1043 aaPredicted RBP18■□□□□ 0.47
POLR2E-201ENST00000215587 GRM5P41594 1212 aa18■□□□□ 0.47
POLR2E-201ENST00000215587 OSTNP61366 133 aa18■□□□□ 0.47
POLR2E-201ENST00000215587 POU5F1Q01860 360 aaKnown RBP18■□□□□ 0.47
POLR2E-201ENST00000215587 CCDC173Q0VFZ6 552 aa18■□□□□ 0.47
POLR2E-201ENST00000215587 FAAP100Q0VG06 881 aa18■□□□□ 0.47
POLR2E-201ENST00000215587 LRRC26Q2I0M4 334 aa18■□□□□ 0.47
POLR2E-201ENST00000215587 PARD3BQ8TEW8 1205 aa18■□□□□ 0.47
POLR2E-201ENST00000215587 CCDC127Q96BQ5 260 aa18■□□□□ 0.47
POLR2E-201ENST00000215587 AGO3Q9H9G7 860 aaKnown RBP18■□□□□ 0.47
POLR2E-201ENST00000215587 GOLGA6L6A8MZA4 724 aa17.99■□□□□ 0.47
POLR2E-201ENST00000215587 PARNO95453 639 aaKnown RBP17.99■□□□□ 0.47
POLR2E-201ENST00000215587 CLTBP09497 229 aa17.99■□□□□ 0.47
POLR2E-201ENST00000215587 DLATP10515 647 aaKnown RBP17.99■□□□□ 0.47
POLR2E-201ENST00000215587 TNFSF9P41273 254 aa17.99■□□□□ 0.47
POLR2E-201ENST00000215587 UBE2Q1Q7Z7E8 422 aa17.99■□□□□ 0.47
POLR2E-201ENST00000215587 VSTM4Q8IW00 320 aa17.99■□□□□ 0.47
POLR2E-201ENST00000215587 HACE1Q8IYU2 909 aa17.99■□□□□ 0.47
POLR2E-201ENST00000215587 CEP120Q8N960 986 aa17.99■□□□□ 0.47
POLR2E-201ENST00000215587 FAM212AQ96EL1 285 aa17.99■□□□□ 0.47
POLR2E-201ENST00000215587 ACAP3Q96P50 834 aa17.99■□□□□ 0.47
POLR2E-201ENST00000215587 EIF2AQ9BY44 585 aaKnown RBP17.99■□□□□ 0.47
POLR2E-201ENST00000215587 TMEM39AQ9NV64 488 aa17.99■□□□□ 0.47
POLR2E-201ENST00000215587 A0A1W2PQC6 194 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 LRRIQ3A6PVS8 624 aaPredicted RBP17.98■□□□□ 0.47
POLR2E-201ENST00000215587 GTF2H1P32780 548 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 FMO5P49326 533 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 YARSP54577 528 aaKnown RBP17.98■□□□□ 0.47
POLR2E-201ENST00000215587 MCCD1P59942 119 aaPredicted RBP17.98■□□□□ 0.47
POLR2E-201ENST00000215587 DLG4P78352 724 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 MYL7Q01449 175 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 ENOX2Q16206 610 aaKnown RBP17.98■□□□□ 0.47
POLR2E-201ENST00000215587 UBXN11Q5T124 520 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 FAM43BQ6ZT52 329 aaPredicted RBP17.98■□□□□ 0.47
POLR2E-201ENST00000215587 TMC6Q7Z403 805 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 PLEKHO2Q8TD55 490 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 PCMTD1Q96MG8 357 aaPredicted RBP17.98■□□□□ 0.47
POLR2E-201ENST00000215587 ERGIC2Q96RQ1 377 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 CGRRF1Q99675 332 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 IFIH1Q9BYX4 1025 aaKnown RBP17.98■□□□□ 0.47
POLR2E-201ENST00000215587 PPP1R12CQ9BZL4 782 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 MMRN2Q9H8L6 949 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 PDE11AQ9HCR9 933 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 TBX21Q9UL17 535 aa17.98■□□□□ 0.47
POLR2E-201ENST00000215587 UNC80Q8N2C7 3258 aa17.97■□□□□ 0.47
POLR2E-201ENST00000215587 SOX1O00570 391 aaPredicted RBP17.97■□□□□ 0.47
POLR2E-201ENST00000215587 CXCL8P10145 99 aa17.97■□□□□ 0.47
POLR2E-201ENST00000215587 TNNI1P19237 187 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms