RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 NELFBQ8WX92 580 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 MFSD14AQ96MC6 490 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 OSMRQ99650 979 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 HSD3B7Q9H2F3 369 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 TLR9Q9NR96 1032 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 DNM3Q9UQ16 869 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 PCDHB12Q9Y5F1 795 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 MAFBQ9Y5Q3 323 aaPredicted RBP13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 ZDBF2Q9HCK1 2354 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 DENND3A2RUS2 1198 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 ESPNB1AK53 854 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 EML1O00423 815 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 PSMA7O14818 248 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 GPR182O15218 404 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 VTNP04004 478 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 SSBP05455 408 aaKnown RBP eCLIP13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 SPATA31C1P0DKV0 1188 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 PRCPP42785 496 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 UBASH3AP57075 661 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 COBLL1Q53SF7 1204 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 IER5LQ5T953 404 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 MIS18BP1Q6P0N0 1132 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 POTEGQ6S5H5 508 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 TRIM67Q6ZTA4 783 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 DYMQ7RTS9 669 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 ZSCAN30Q86W11 494 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 LINC01465Q8N7H1 131 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 PRSS33Q8NF86 280 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 BBXQ8WY36 941 aaPredicted RBP13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 DDX12PQ92771 950 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 DHTKD1Q96HY7 919 aaPredicted RBP13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 PHOX2BQ99453 314 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 PHF7Q9BWX1 381 aaPredicted RBP13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 XPO4Q9C0E2 1151 aaKnown RBP13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 S1PR5Q9H228 398 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 ADAMTS10Q9H324 1103 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 TMEM161AQ9NX61 479 aa13.08□□□□□ -0.32
ERGIC3-220ENST00000640748 WDR81Q562E7 1941 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 TMEM221A6NGB7 291 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 M0R296 226 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 CHMP2AO43633 222 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 ATP1A3P13637 1013 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 IDEP14735 1019 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 ZNF18P17022 549 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 MSNP26038 577 aaKnown RBP13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 CLCN3P51790 818 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 ZXDAP98168 799 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 ZNF746Q6NUN9 644 aaPredicted RBP13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 TMEM184AQ6ZMB5 413 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 GPBP1Q86WP2 473 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 CCDC65Q8IXS2 484 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 THNSL1Q8IYQ7 743 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 SYT2Q8N9I0 419 aaPredicted RBP13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 MICAL1Q8TDZ2 1067 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 DYDC2Q96IM9 177 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 CASD1Q96PB1 797 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 MED15Q96RN5 788 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 UNC45AQ9H3U1 944 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 ELAC1Q9H777 363 aaKnown RBP13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 AAASQ9NRG9 546 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 TBC1D22BQ9NU19 505 aa13.07□□□□□ -0.32
ERGIC3-220ENST00000640748 EVPLQ92817 2033 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 BICDL2A1A5D9 508 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 HIDE1A8MVS5 230 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 ZNF862O60290 1169 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 KRT18P05783 430 aaKnown RBP13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 ATF7P17544 494 aaPredicted RBP13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 LAG3P18627 525 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 CYP11B2P19099 503 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 CCNE1P24864 410 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 PBX3P40426 434 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 SLC12A3P55017 1021 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 PLCB3Q01970 1234 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 CYP4A11Q02928 519 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 SPAG1Q07617 926 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 CTTNQ14247 550 aaKnown RBP13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 SPOUT1Q5T280 376 aaKnown RBP13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 SYCE2Q6PIF2 218 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 B3GNT9Q6UX72 402 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 TRMT1LQ7Z2T5 733 aaKnown RBP13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 MIER3Q7Z3K6 550 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 SMAP1Q8IYB5 467 aaPredicted RBP13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 METTL13Q8N6R0 699 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 DNAJC19Q96DA6 116 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 ASIC4Q96FT7 647 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 RPGRIP1Q96KN7 1286 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 CDCA3Q99618 268 aaPredicted RBP13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 HSD17B14Q9BPX1 270 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 ATP6V0A4Q9HBG4 840 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 SAMSN1Q9NSI8 373 aaKnown RBP13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 PANK4Q9NVE7 773 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 IMPACTQ9P2X3 320 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 TCEAL9Q9UHQ7 104 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 MAPK8IP1Q9UQF2 711 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 LZTS1Q9Y250 596 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 ZKSCAN5Q9Y2L8 839 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 PCDHA10Q9Y5I2 948 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 MYH11P35749 1972 aa13.06□□□□□ -0.32
ERGIC3-220ENST00000640748 SLITRK3O94933 977 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 EHHADHQ08426 723 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms