RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 HAUS2Q9NVX0 235 aa21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 HERC5Q9UII4 1024 aaKnown RBP21.62■■□□□ 1.05
SYNGAP1-227ENST00000638142 SMIM23A6NLE4 172 aa21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 ECE2O60344 883 aa21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 SGPL1O95470 568 aa21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 MXI1P50539 228 aa21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 MFSD5Q6N075 450 aa21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 TAOK1Q7L7X3 1001 aa21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 NOP9Q86U38 636 aaKnown RBP21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 ZNF564Q8TBZ8 553 aaPredicted RBP21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 CBWD1Q9BRT8 395 aa21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 RASGRF2O14827 1237 aa21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 SPOPO43791 374 aa21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 ONECUT3O60422 494 aaPredicted RBP21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 CYP1A2P05177 515 aa21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 SNRPFP62306 86 aaKnown RBP21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 ROPN1BQ9BZX4 212 aaPredicted RBP21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 ROPN1Q9HAT0 212 aaPredicted RBP21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 HSPBP1Q9NZL4 362 aa21.61■■□□□ 1.05
SYNGAP1-227ENST00000638142 SCN9AQ15858 1988 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 GSTA1P08263 222 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 FGFR4P22455 802 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 NLGN1Q8N2Q7 840 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 EPS8L3Q8TE67 593 aaKnown RBP21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 MXRA8Q9BRK3 442 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 SAMD15Q9P1V8 674 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 UVRAGQ9P2Y5 699 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 GTF3C4Q9UKN8 822 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 BCS1LQ9Y276 419 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 COL11A2P13942 1736 aaPredicted RBP21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 TISP43B9A030 160 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 PPIP5K2O43314 1243 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 PLS3P13797 630 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 RASA3Q14644 834 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 SIX1Q15475 284 aaPredicted RBP21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 MIER3Q7Z3K6 550 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 KAT5Q92993 513 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 NUP85Q9BW27 656 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 TMEM117Q9H0C3 514 aa21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 NSRP1Q9H0G5 558 aaKnown RBP21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 DBR1Q9UK59 544 aaKnown RBP21.6■■□□□ 1.05
SYNGAP1-227ENST00000638142 ZNF646O15015 1829 aaPredicted RBP21.59■■□□□ 1.05
SYNGAP1-227ENST00000638142 P4HBP07237 508 aaKnown RBP21.59■■□□□ 1.05
SYNGAP1-227ENST00000638142 RARAP10276 462 aa21.59■■□□□ 1.05
SYNGAP1-227ENST00000638142 RWDD2BP57060 319 aa21.59■■□□□ 1.05
SYNGAP1-227ENST00000638142 CC2D2BQ6DHV5 1058 aa21.59■■□□□ 1.05
SYNGAP1-227ENST00000638142 TRMT10CQ7L0Y3 403 aaKnown RBP21.59■■□□□ 1.05
SYNGAP1-227ENST00000638142 LRRC34Q8IZ02 419 aa21.59■■□□□ 1.05
SYNGAP1-227ENST00000638142 ACER1Q8TDN7 264 aa21.59■■□□□ 1.05
SYNGAP1-227ENST00000638142 LRRC19Q9H756 370 aa21.59■■□□□ 1.05
SYNGAP1-227ENST00000638142 TCRBV7S2A1N4TA0A589 114 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 ATMINO43313 823 aaPredicted RBP21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 ATP2C2O75185 946 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 ECEL1O95672 775 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 MFAP3P55082 362 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 CALCOCO2Q13137 446 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 AUHQ13825 339 aaKnown RBP21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 MAEAQ7L5Y9 396 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 SEPT12Q8IYM1 358 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 GIMAP7Q8NHV1 300 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 PLEKHO2Q8TD55 490 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 SHC3Q92529 594 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 SLCO2A1Q92959 643 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 PRMT1Q99873 361 aaKnown RBP21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 ST6GALNAC4Q9H4F1 302 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 CHORDC1Q9UHD1 332 aaPredicted RBP21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 MCCD1P59942 119 aaPredicted RBP21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 FMO1Q01740 532 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 UBAP2Q5T6F2 1119 aaKnown RBP21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 KREMEN1Q96MU8 473 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 PLVAPQ9BX97 442 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 PTPN22Q9Y2R2 807 aa21.58■■□□□ 1.05
SYNGAP1-227ENST00000638142 ANKRD63C9JTQ0 380 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 PLA2G6O60733 806 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 GTF2BQ00403 316 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 FAM228AQ86W67 206 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 ZNF653Q96CK0 615 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 IWS1Q96ST2 819 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 DDX39AO00148 427 aaKnown RBP21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 CYP26A1O43174 497 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 RARRES1P49788 294 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 TNIP1Q15025 636 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 NBPF9Q3BBW0 867 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 ZNF568Q3ZCX4 644 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 RNF207Q6ZRF8 634 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 MIGA2Q7L4E1 593 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 FAM160B2Q86V87 743 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 SLC47A2Q86VL8 602 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 PPM1KQ8N3J5 372 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 UHMK1Q8TAS1 419 aaKnown RBP21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 DEFB129Q9H1M3 183 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 WHRNQ9P202 907 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 TPX2Q9ULW0 747 aaKnown RBP21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 SLC12A4Q9UP95 1085 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 ZHX2Q9Y6X8 837 aa21.57■■□□□ 1.04
SYNGAP1-227ENST00000638142 ITGB5P18084 799 aa21.56■■□□□ 1.04
SYNGAP1-227ENST00000638142 SLCO1A2P46721 670 aa21.56■■□□□ 1.04
SYNGAP1-227ENST00000638142 PPP1R7Q15435 360 aa21.56■■□□□ 1.04
SYNGAP1-227ENST00000638142 CNGA2Q16280 664 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms