RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 C2orf40Q9H1Z8 148 aa20.48■□□□□ 0.87
PNKP-224ENST00000631020 FZD8Q9H461 694 aa20.48■□□□□ 0.87
PNKP-224ENST00000631020 NSUN3Q9H649 340 aaKnown RBP20.48■□□□□ 0.87
PNKP-224ENST00000631020 UBE2ZQ9H832 354 aaPredicted RBP20.48■□□□□ 0.87
PNKP-224ENST00000631020 MRPL44Q9H9J2 332 aaKnown RBP20.48■□□□□ 0.87
PNKP-224ENST00000631020 KCNG1Q9UIX4 513 aa20.48■□□□□ 0.87
PNKP-224ENST00000631020 USP20Q9Y2K6 914 aa20.48■□□□□ 0.87
PNKP-224ENST00000631020 TCF20Q9UGU0 1960 aaKnown RBP20.48■□□□□ 0.87
PNKP-224ENST00000631020 TTLL13PA6NNM8 815 aa20.48■□□□□ 0.87
PNKP-224ENST00000631020 K7ENM7 598 aa20.48■□□□□ 0.87
PNKP-224ENST00000631020 EDN1P05305 212 aa20.48■□□□□ 0.87
PNKP-224ENST00000631020 EFNA5P52803 228 aa20.48■□□□□ 0.87
PNKP-224ENST00000631020 ZBTB8OSQ8IWT0 167 aa20.48■□□□□ 0.87
PNKP-224ENST00000631020 KCNN1Q92952 543 aa20.48■□□□□ 0.87
PNKP-224ENST00000631020 ST6GALNAC4Q9H4F1 302 aa20.48■□□□□ 0.87
PNKP-224ENST00000631020 TMEM134Q9H6X4 195 aa20.48■□□□□ 0.87
PNKP-224ENST00000631020 K7ERI5 159 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 NCK2O43639 380 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 PPP1R37O75864 691 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 RHOBTB3O94955 611 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 MYBP10242 640 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 ZSCAN20P17040 1043 aaPredicted RBP20.47■□□□□ 0.87
PNKP-224ENST00000631020 KCNQ1P51787 676 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 GTF2BQ00403 316 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 STK4Q13043 487 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 KCNB1Q14721 858 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 FAM26FQ5R3K3 315 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 NT5DC1Q5TFE4 455 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 SMARCE1Q969G3 411 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 GSDMAQ96QA5 445 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 NUP62CLQ9H1M0 184 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 SLC39A2Q9NP94 309 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 EXOC1Q9NV70 894 aa20.47■□□□□ 0.87
PNKP-224ENST00000631020 GRM6O15303 877 aa20.46■□□□□ 0.87
PNKP-224ENST00000631020 B4GALT5O43286 388 aa20.46■□□□□ 0.87
PNKP-224ENST00000631020 HOXA2O43364 376 aa20.46■□□□□ 0.87
PNKP-224ENST00000631020 SMC2O95347 1197 aa20.46■□□□□ 0.87
PNKP-224ENST00000631020 HOXA11P31270 313 aaPredicted RBP20.46■□□□□ 0.87
PNKP-224ENST00000631020 KCNA1Q09470 495 aa20.46■□□□□ 0.87
PNKP-224ENST00000631020 MAPK6Q16659 721 aa20.46■□□□□ 0.87
PNKP-224ENST00000631020 FAM187BQ17R55 369 aa20.46■□□□□ 0.87
PNKP-224ENST00000631020 CATSPER4Q7RTX7 472 aa20.46■□□□□ 0.87
PNKP-224ENST00000631020 KIAA1468Q9P260 1216 aa20.46■□□□□ 0.87
PNKP-224ENST00000631020 PLAGL2Q9UPG8 496 aa20.46■□□□□ 0.87
PNKP-224ENST00000631020 MYO7AQ13402 2215 aa20.46■□□□□ 0.87
PNKP-224ENST00000631020 TSPAN1O60635 241 aa20.45■□□□□ 0.86
PNKP-224ENST00000631020 PRKCBP05771 671 aa20.45■□□□□ 0.86
PNKP-224ENST00000631020 PTMSP20962 102 aa20.45■□□□□ 0.86
PNKP-224ENST00000631020 SFPQP23246 707 aaKnown RBP eCLIP20.45■□□□□ 0.86
PNKP-224ENST00000631020 PSMD2Q13200 908 aa20.45■□□□□ 0.86
PNKP-224ENST00000631020 LEXMQ3ZCV2 418 aa20.45■□□□□ 0.86
PNKP-224ENST00000631020 PAN2Q504Q3 1202 aaKnown RBP20.45■□□□□ 0.86
PNKP-224ENST00000631020 PPP4R3CPQ6ZMV5 832 aa20.45■□□□□ 0.86
PNKP-224ENST00000631020 EPM2AIP1Q7L775 607 aaPredicted RBP20.45■□□□□ 0.86
PNKP-224ENST00000631020 KIAA0895Q8NCT3 520 aa20.45■□□□□ 0.86
PNKP-224ENST00000631020 CHST12Q9NRB3 414 aa20.45■□□□□ 0.86
PNKP-224ENST00000631020 TMEM63CQ9P1W3 806 aa20.45■□□□□ 0.86
PNKP-224ENST00000631020 MAN1B1Q9UKM7 699 aa20.45■□□□□ 0.86
PNKP-224ENST00000631020 TBX20Q9UMR3 447 aa20.45■□□□□ 0.86
PNKP-224ENST00000631020 PHLPP2Q6ZVD8 1323 aa20.44■□□□□ 0.86
PNKP-224ENST00000631020 ACKR2O00590 384 aa20.44■□□□□ 0.86
PNKP-224ENST00000631020 GCNT3O95395 438 aa20.44■□□□□ 0.86
PNKP-224ENST00000631020 HOXD13P35453 343 aa20.44■□□□□ 0.86
PNKP-224ENST00000631020 KLHL40Q2TBA0 621 aa20.44■□□□□ 0.86
PNKP-224ENST00000631020 TCEAL5Q5H9L2 206 aa20.44■□□□□ 0.86
PNKP-224ENST00000631020 ISM2Q6H9L7 571 aa20.44■□□□□ 0.86
PNKP-224ENST00000631020 RSPH1Q8WYR4 309 aa20.44■□□□□ 0.86
PNKP-224ENST00000631020 PABPC5Q96DU9 382 aaKnown RBP20.44■□□□□ 0.86
PNKP-224ENST00000631020 TRAIPQ9BWF2 469 aa20.44■□□□□ 0.86
PNKP-224ENST00000631020 IKZF4Q9H2S9 585 aa20.44■□□□□ 0.86
PNKP-224ENST00000631020 AAASQ9NRG9 546 aa20.44■□□□□ 0.86
PNKP-224ENST00000631020 PRMT7Q9NVM4 692 aaPredicted RBP20.44■□□□□ 0.86
PNKP-224ENST00000631020 H0YCG3 227 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 ERLIN2O94905 339 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 PRPF6O94906 941 aaKnown RBP20.43■□□□□ 0.86
PNKP-224ENST00000631020 ARF4P18085 180 aaPredicted RBP20.43■□□□□ 0.86
PNKP-224ENST00000631020 BMP6P22004 513 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 GATMP50440 423 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 PCBP1Q15365 356 aaKnown RBP eCLIP20.43■□□□□ 0.86
PNKP-224ENST00000631020 CPB2Q96IY4 423 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 PRIMPOLQ96LW4 560 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 TMEM117Q9H0C3 514 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 AGPAT5Q9NUQ2 364 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 GDAQ9Y2T3 454 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 PCDHB12Q9Y5F1 795 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 A0A0U1RQF3 1178 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 TBKBP1A7MCY6 615 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 BIN1O00499 593 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 EOMESO95936 686 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 ITGB1P05556 798 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 UBE3AQ05086 875 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 PRPF4BQ13523 1007 aaKnown RBP20.43■□□□□ 0.86
PNKP-224ENST00000631020 PUS10Q3MIT2 529 aaKnown RBP20.43■□□□□ 0.86
PNKP-224ENST00000631020 KLHL23Q8NBE8 558 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 ZNF507Q8TCN5 953 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 SPPL3Q8TCT6 385 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 SCFD1Q8WVM8 642 aa20.43■□□□□ 0.86
PNKP-224ENST00000631020 CCDC47Q96A33 483 aaKnown RBP20.43■□□□□ 0.86
PNKP-224ENST00000631020 TARS2Q9BW92 718 aaKnown RBP20.43■□□□□ 0.86
PNKP-224ENST00000631020 PCDHB13Q9Y5F0 798 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms