RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 LGALS16A8MUM7 142 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 ERLIN1O75477 346 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 TRPV6Q9H1D0 765 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 MTIF3Q9H2K0 278 aaKnown RBP13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 THAP9Q9H5L6 903 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 CASP8AP2Q9UKL3 1982 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 GUCY2CP25092 1073 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 KRT9P35527 623 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 NAMPTP43490 491 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 VPS36Q86VN1 386 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 CHP1Q99653 195 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 TOPORSQ9NS56 1045 aaPredicted RBP13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 EMSYQ7Z589 1322 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 A0A1W2PQC6 194 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 ZNF233A6NK53 670 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 SGPL1O95470 568 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 PSMC2P35998 433 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 PURAQ00577 322 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 TLE2Q04725 743 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 C17orf75Q9HAS0 396 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 CDY2AQ9Y6F7 541 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 DOCK3Q8IZD9 2030 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 MROH7Q68CQ1 1323 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 TTC26A0AVF1 554 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 GNA14O95837 355 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 C11orf49Q9H6J7 331 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 AGO2Q9UKV8 859 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 GPR182O15218 404 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 MAFO75444 373 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 SLC12A3P55017 1021 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 ATF7IP2Q5U623 682 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 ANKRD40Q6AI12 368 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 XXYLT1Q8NBI6 393 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 HIPK3Q9H422 1215 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 NR3C1P04150 777 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 TDRD12Q587J7 1177 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 GUF1Q8N442 669 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 TRPV1Q8NER1 839 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 OR8K1Q8NGG5 319 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 FGD4Q96M96 766 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 CRACR2AQ9BSW2 395 aa13.5□□□□□ -0.25
SYNGAP1-207ENST00000628646 A0A1W2PQ45 241 aaPredicted RBP13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 A0A1W2PQY0 241 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 XPOTO43592 962 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 ACOT2P49753 483 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 ARID5AQ03989 594 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 RAPGEF1Q13905 1077 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 MEA1Q16626 185 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 NEK11Q8NG66 645 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 SEPT8Q92599 483 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 SEMA6BQ9H3T3 888 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 LZTFL1Q9NQ48 299 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 TYW1Q9NV66 732 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 TRPV2Q9Y5S1 764 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 FRMPD4Q14CM0 1322 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 ADGRA2Q96PE1 1338 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 KRT86O43790 486 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 RPLP2P05387 115 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 AMPD2Q01433 879 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 C1orf186Q6ZWK4 172 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 ASAP3Q8TDY4 903 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 CRYGNQ8WXF5 182 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 CPB2Q96IY4 423 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 CNOT6LQ96LI5 555 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 METTL14Q9HCE5 456 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 WRAP73Q9P2S5 460 aaPredicted RBP13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 PPME1Q9Y570 386 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 AKR1B10O60218 316 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 ACTN1P12814 892 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 PLA2G4AP47712 749 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 SPIRE1Q08AE8 756 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 NOTUMQ6P988 496 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 C7orf61Q8IZ16 206 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 GOLGA6L1Q8N7Z2 621 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 ST7Q9NRC1 585 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 CAPN11Q9UMQ6 739 aa13.49□□□□□ -0.25
SYNGAP1-207ENST00000628646 SASH3O75995 380 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 LYPLA2O95372 231 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 LDHAP00338 332 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 CCDC42Q96M95 316 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 CEP89Q96ST8 783 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 MMS19Q96T76 1030 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 TBX20Q9UMR3 447 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 RBBP6Q7Z6E9 1792 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 NPTXRO95502 500 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 KLK7P49862 253 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 LRRC63Q05C16 580 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 SEZ6Q53EL9 994 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 F2P00734 622 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 GLRA2P23416 452 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 MRPS6P82932 125 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 PPP2R3AQ06190 1150 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 TEX35Q5T0J7 233 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 TMCO3Q6UWJ1 677 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 ANKRD36BP1Q96IX9 119 aa13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 GNEQ9Y223 722 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-207ENST00000628646 CTAGE9A4FU28 777 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 ARVCFO00192 962 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 DNM1LO00429 736 aa13.47□□□□□ -0.25
SYNGAP1-207ENST00000628646 EIF4BP23588 611 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms